Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05955

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,306,248	+	roxA	OKGIIK_05950	0.41	-1.8
1,306,249	-	roxA	OKGIIK_05950	0.41	+0.0
1,306,518	+	roxA	OKGIIK_05950	0.63	+0.0
1,306,518	+	roxA	OKGIIK_05950	0.63	-0.7
1,306,869	+				-0.1
1,306,968	+				-1.1
1,306,968	+				+1.5
1,306,968	+				-0.8
1,306,969	-				+0.4
1,306,969	-				-2.2
1,307,419	+	tauE	OKGIIK_05955	0.57	-1.8
1,307,419	+	tauE	OKGIIK_05955	0.57	+3.2
1,307,419	+	tauE	OKGIIK_05955	0.57	+1.5
1,307,419	+	tauE	OKGIIK_05955	0.57	+0.6
1,307,419	+	tauE	OKGIIK_05955	0.57	+1.4
1,307,419	+	tauE	OKGIIK_05955	0.57	+2.3
1,307,419	+	tauE	OKGIIK_05955	0.57	-0.8
1,307,419	+	tauE	OKGIIK_05955	0.57	+1.5
1,307,419	+	tauE	OKGIIK_05955	0.57	+0.8
1,307,419	+	tauE	OKGIIK_05955	0.57	+2.1
1,307,419	+	tauE	OKGIIK_05955	0.57	+0.3
1,307,419	+	tauE	OKGIIK_05955	0.57	+2.9
1,307,419	+	tauE	OKGIIK_05955	0.57	+0.6
1,307,419	+	tauE	OKGIIK_05955	0.57	+2.6
1,307,420	-	tauE	OKGIIK_05955	0.57	+0.0
1,307,420	-	tauE	OKGIIK_05955	0.57	-1.0
1,307,420	-	tauE	OKGIIK_05955	0.57	-0.2
1,307,420	-	tauE	OKGIIK_05955	0.57	+0.8
1,307,420	-	tauE	OKGIIK_05955	0.57	+0.0
1,307,420	-	tauE	OKGIIK_05955	0.57	+0.8
1,307,420	-	tauE	OKGIIK_05955	0.57	-0.1
1,307,420	-	tauE	OKGIIK_05955	0.57	-0.2
1,307,420	-	tauE	OKGIIK_05955	0.57	+0.1
1,307,420	-	tauE	OKGIIK_05955	0.57	+0.0
1,307,470	+	tauE	OKGIIK_05955	0.63	+2.4
1,307,470	+	tauE	OKGIIK_05955	0.63	+0.9
1,307,470	+	tauE	OKGIIK_05955	0.63	+0.8
1,307,470	+	tauE	OKGIIK_05955	0.63	+0.4
1,307,470	+	tauE	OKGIIK_05955	0.63	+0.4
1,307,470	+	tauE	OKGIIK_05955	0.63	+1.6
1,307,470	+	tauE	OKGIIK_05955	0.63	+2.6
1,307,470	+	tauE	OKGIIK_05955	0.63	+0.0
1,307,470	+	tauE	OKGIIK_05955	0.63	+2.0
1,307,470	+	tauE	OKGIIK_05955	0.63	-0.3
1,307,470	+	tauE	OKGIIK_05955	0.63	+1.4
1,307,471	-	tauE	OKGIIK_05955	0.64	+0.2
1,307,471	-	tauE	OKGIIK_05955	0.64	-0.2
1,307,471	-	tauE	OKGIIK_05955	0.64	-1.6
1,307,471	-	tauE	OKGIIK_05955	0.64	+1.0
1,307,471	-	tauE	OKGIIK_05955	0.64	+0.3
1,307,471	-	tauE	OKGIIK_05955	0.64	+1.0
1,307,471	-	tauE	OKGIIK_05955	0.64	+1.5
1,307,471	-	tauE	OKGIIK_05955	0.64	-1.4
1,307,471	-	tauE	OKGIIK_05955	0.64	+0.0
1,307,471	-	tauE	OKGIIK_05955	0.64	+0.0
1,307,590	+	tauE	OKGIIK_05955	0.79	+1.5
1,307,591	-	tauE	OKGIIK_05955	0.80	+1.1
1,307,591	-	tauE	OKGIIK_05955	0.80	-0.2
1,307,662	+	tauE	OKGIIK_05955	0.89	+2.0
1,307,662	+	tauE	OKGIIK_05955	0.89	+2.7
1,307,663	-	tauE	OKGIIK_05955	0.89	-0.0
1,307,663	-	tauE	OKGIIK_05955	0.89	+0.0
1,307,663	-	tauE	OKGIIK_05955	0.89	+1.2
1,307,777	+				+0.2
1,307,777	+				+0.5
1,307,777	+				+0.9
1,307,777	+				-0.9
1,307,777	+				+1.8
1,307,778	-				-0.2
1,307,778	-				+0.1
1,307,778	-				-0.6
1,307,784	+				+0.0
1,307,784	+				-0.2
1,307,784	+				-0.8
1,307,812	+				+0.4
1,307,812	+				+3.5
1,307,812	+				+2.6
1,307,812	+				+1.8
1,307,812	+				+1.5
1,307,813	-				+0.0
1,307,825	+				+1.8
1,307,825	+				+1.8
1,307,825	+				+0.6
1,307,825	+				-0.5
1,307,825	+				+1.4
1,307,825	+				+0.2
1,307,826	-				-0.5
1,307,826	-				+2.4
1,307,826	-				-2.4
1,307,826	-				+0.4
1,307,826	-				+0.4
1,307,870	+				+0.4
1,307,917	+				-0.6
1,308,014	+				+1.4
1,308,015	-				-0.2
1,308,015	-				-0.6
1,308,015	-				-0.5
1,308,212	+		OKGIIK_05960	0.17	+1.1
1,308,383	+		OKGIIK_05960	0.26	+0.0
1,308,383	+		OKGIIK_05960	0.26	-0.4
1,308,383	+		OKGIIK_05960	0.26	+0.6
1,308,383	+		OKGIIK_05960	0.26	-1.0
1,308,384	-		OKGIIK_05960	0.26	-0.1
1,308,384	-		OKGIIK_05960	0.26	-0.6
1,308,717	-		OKGIIK_05960	0.45	+0.0