Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05915

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,295,631	+				-2.0
1,295,643	+				-0.8
1,295,643	+				+0.0
1,295,643	+				-0.7
1,295,643	+				+0.0
1,295,643	+				+0.4
1,295,643	+				-0.2
1,295,643	+				-0.8
1,295,643	+				-0.8
1,295,643	+				+0.3
1,295,643	+				+0.3
1,295,646	+				+1.2
1,295,646	+				-0.2
1,295,700	+				+0.3
1,295,721	+	dnaJ	OKGIIK_05910	0.10	+0.2
1,295,721	+	dnaJ	OKGIIK_05910	0.10	-1.1
1,295,721	+	dnaJ	OKGIIK_05910	0.10	-0.2
1,295,721	+	dnaJ	OKGIIK_05910	0.10	-1.1
1,295,721	+	dnaJ	OKGIIK_05910	0.10	-1.0
1,295,721	+	dnaJ	OKGIIK_05910	0.10	-1.2
1,295,721	+	dnaJ	OKGIIK_05910	0.10	-1.2
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-1.4
1,295,722	-	dnaJ	OKGIIK_05910	0.10	+0.2
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-0.2
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-2.2
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-0.2
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-0.7
1,295,722	-	dnaJ	OKGIIK_05910	0.10	+0.2
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-0.2
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-0.4
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-1.7
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-2.6
1,295,722	-	dnaJ	OKGIIK_05910	0.10	+1.1
1,295,722	-	dnaJ	OKGIIK_05910	0.10	+0.3
1,295,722	-	dnaJ	OKGIIK_05910	0.10	+0.2
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-1.5
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-1.1
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-0.6
1,295,722	-	dnaJ	OKGIIK_05910	0.10	+1.3
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-1.7
1,295,820	+	dnaJ	OKGIIK_05910	0.21	+0.6
1,295,820	+	dnaJ	OKGIIK_05910	0.21	+0.3
1,295,820	+	dnaJ	OKGIIK_05910	0.21	+1.3
1,295,820	+	dnaJ	OKGIIK_05910	0.21	+0.8
1,295,820	+	dnaJ	OKGIIK_05910	0.21	-1.8
1,295,820	+	dnaJ	OKGIIK_05910	0.21	+0.1
1,295,821	-	dnaJ	OKGIIK_05910	0.22	+0.3
1,295,821	-	dnaJ	OKGIIK_05910	0.22	-0.2
1,295,821	-	dnaJ	OKGIIK_05910	0.22	-0.6
1,295,821	-	dnaJ	OKGIIK_05910	0.22	-0.8
1,295,821	-	dnaJ	OKGIIK_05910	0.22	-1.4
1,295,821	-	dnaJ	OKGIIK_05910	0.22	-2.4
1,296,478	-				+0.3
1,296,478	-				-0.9
1,296,478	-				-1.4
1,296,656	+	pilH	OKGIIK_05915	0.17	+2.7
1,296,656	+	pilH	OKGIIK_05915	0.17	+0.6
1,296,656	+	pilH	OKGIIK_05915	0.17	+1.2
1,296,656	+	pilH	OKGIIK_05915	0.17	+0.8
1,296,656	+	pilH	OKGIIK_05915	0.17	+0.6
1,296,656	+	pilH	OKGIIK_05915	0.17	+2.3
1,296,656	+	pilH	OKGIIK_05915	0.17	+1.0
1,296,656	+	pilH	OKGIIK_05915	0.17	+0.2
1,296,656	+	pilH	OKGIIK_05915	0.17	+0.2
1,296,656	+	pilH	OKGIIK_05915	0.17	+0.3
1,296,656	+	pilH	OKGIIK_05915	0.17	+0.3
1,296,656	+	pilH	OKGIIK_05915	0.17	+0.7
1,296,656	+	pilH	OKGIIK_05915	0.17	+0.8
1,296,657	-	pilH	OKGIIK_05915	0.18	-0.3
1,296,732	+	pilH	OKGIIK_05915	0.38	-1.4
1,296,732	+	pilH	OKGIIK_05915	0.38	-0.7
1,296,733	-	pilH	OKGIIK_05915	0.39	+2.7
1,296,733	-	pilH	OKGIIK_05915	0.39	+0.0
1,296,957	+				+0.0
1,296,957	+				+1.0
1,296,957	+				-0.2
1,296,957	+				+0.4
1,296,957	+				+0.1
1,296,957	+				+0.2
1,296,957	+				+0.3
1,296,957	+				+0.3
1,296,957	+				-0.2
1,296,958	-				+0.3
1,296,958	-				+1.6
1,296,958	-				-0.1
1,296,958	-				-0.1
1,296,958	-				+1.3
1,296,958	-				-0.4
1,296,958	-				+0.6
1,296,958	-				-0.2
1,296,958	-				+1.3
1,296,958	-				+0.0
1,296,958	-				+1.3
1,296,966	-				+0.1
1,296,966	-				-0.2
1,296,966	-				+0.8
1,296,966	-				+0.5
1,296,986	-				-1.0
1,296,992	-				-0.7
1,296,992	-				-0.7
1,296,992	-				+1.3
1,297,007	+				+1.0
1,297,007	+				+0.0
1,297,008	-				+0.3
1,297,008	-				-0.2
1,297,008	-				+1.1
1,297,008	-				+0.9
1,297,008	-				+1.3
1,297,008	-				+0.8
1,297,008	-				+0.0
1,297,008	-				-0.2
1,297,008	-				+0.0
1,297,008	-				-0.7
1,297,008	-				-1.0
1,297,008	-				+0.8
1,297,008	-				-1.9
1,297,083	+				+0.0
1,297,083	+				+0.3
1,297,083	+				+1.6
1,297,083	+				+1.7
1,297,083	+				-0.7
1,297,083	+				+1.7
1,297,084	-				-0.6
1,297,084	-				-0.5
1,297,084	-				+0.0
1,297,134	+		OKGIIK_05920	0.11	-0.1
1,297,495	+		OKGIIK_05920	0.47	-1.0
1,297,495	+		OKGIIK_05920	0.47	+0.6
1,297,495	+		OKGIIK_05920	0.47	+0.5
1,297,495	+		OKGIIK_05920	0.47	-0.2
1,297,495	+		OKGIIK_05920	0.47	-0.7
1,297,495	+		OKGIIK_05920	0.47	+1.1
1,297,495	+		OKGIIK_05920	0.47	-2.0
1,297,495	+		OKGIIK_05920	0.47	-0.7
1,297,495	+		OKGIIK_05920	0.47	-0.7
1,297,495	+		OKGIIK_05920	0.47	+0.3
1,297,495	+		OKGIIK_05920	0.47	+0.5
1,297,496	-		OKGIIK_05920	0.47	+1.1
1,297,496	-		OKGIIK_05920	0.47	+1.3
1,297,496	-		OKGIIK_05920	0.47	-1.0
1,297,496	-		OKGIIK_05920	0.47	+0.5
1,297,496	-		OKGIIK_05920	0.47	+2.0
1,297,496	-		OKGIIK_05920	0.47	+0.3
1,297,496	-		OKGIIK_05920	0.47	+0.0
1,297,496	-		OKGIIK_05920	0.47	-0.8
1,297,496	-		OKGIIK_05920	0.47	-0.1
1,297,496	-		OKGIIK_05920	0.47	+1.3
1,297,496	-		OKGIIK_05920	0.47	+0.6
1,297,496	-		OKGIIK_05920	0.47	+2.8
1,297,496	-		OKGIIK_05920	0.47	-1.2
1,297,496	-		OKGIIK_05920	0.47	+0.3
1,297,496	-		OKGIIK_05920	0.47	-2.0
1,297,496	-		OKGIIK_05920	0.47	-1.4
1,297,496	-		OKGIIK_05920	0.47	+1.0
1,297,496	-		OKGIIK_05920	0.47	+0.8
1,297,496	-		OKGIIK_05920	0.47	-0.5
1,297,715	+		OKGIIK_05920	0.69	+0.5
1,297,715	+		OKGIIK_05920	0.69	+1.0
1,297,716	-		OKGIIK_05920	0.69	+0.5
1,297,716	-		OKGIIK_05920	0.69	-0.2
1,297,724	+		OKGIIK_05920	0.70	+0.3
1,297,847	+		OKGIIK_05920	0.82	+0.3
1,297,847	+		OKGIIK_05920	0.82	+1.5
1,297,847	+		OKGIIK_05920	0.82	-0.2
1,297,847	+		OKGIIK_05920	0.82	-2.7
1,297,848	-		OKGIIK_05920	0.82	-0.1
1,297,848	-		OKGIIK_05920	0.82	-0.7
1,297,848	-		OKGIIK_05920	0.82	+0.8
1,297,848	-		OKGIIK_05920	0.82	+0.0
1,297,895	+		OKGIIK_05920	0.87	+0.3
1,297,895	+		OKGIIK_05920	0.87	+0.6
1,297,895	+		OKGIIK_05920	0.87	-0.7
1,297,895	+		OKGIIK_05920	0.87	+0.8
1,297,895	+		OKGIIK_05920	0.87	-0.8
1,297,895	+		OKGIIK_05920	0.87	+1.1
1,297,895	+		OKGIIK_05920	0.87	-2.2
1,297,895	+		OKGIIK_05920	0.87	+0.2
1,297,895	+		OKGIIK_05920	0.87	-1.1
1,297,895	+		OKGIIK_05920	0.87	-0.6
1,297,895	+		OKGIIK_05920	0.87	-1.7
1,297,895	+		OKGIIK_05920	0.87	+0.6
1,297,895	+		OKGIIK_05920	0.87	-0.5
1,297,896	-		OKGIIK_05920	0.87	-1.7
1,297,896	-		OKGIIK_05920	0.87	+0.4
1,297,896	-		OKGIIK_05920	0.87	-0.1
1,297,896	-		OKGIIK_05920	0.87	-0.9
1,297,896	-		OKGIIK_05920	0.87	-0.0
1,297,896	-		OKGIIK_05920	0.87	-0.8
1,297,896	-		OKGIIK_05920	0.87	+1.3
1,297,896	-		OKGIIK_05920	0.87	-0.7
1,297,896	-		OKGIIK_05920	0.87	-0.8
1,297,896	-		OKGIIK_05920	0.87	-0.8
1,297,896	-		OKGIIK_05920	0.87	-1.9
1,297,896	-		OKGIIK_05920	0.87	-0.7
1,297,896	-		OKGIIK_05920	0.87	-1.2
1,297,896	-		OKGIIK_05920	0.87	+0.8
1,297,896	-		OKGIIK_05920	0.87	+2.2
1,297,896	-		OKGIIK_05920	0.87	+0.9
1,297,896	-		OKGIIK_05920	0.87	-0.2
1,297,896	-		OKGIIK_05920	0.87	+0.5
1,297,896	-		OKGIIK_05920	0.87	-1.1
1,297,910	+		OKGIIK_05920	0.88	+0.9
1,297,910	+		OKGIIK_05920	0.88	+0.5
1,297,910	+		OKGIIK_05920	0.88	-0.4
1,297,910	+		OKGIIK_05920	0.88	+0.0
1,297,910	+		OKGIIK_05920	0.88	+1.6
1,297,911	-		OKGIIK_05920	0.88	+0.3
1,297,911	-		OKGIIK_05920	0.88	+0.2
1,297,911	-		OKGIIK_05920	0.88	+0.8
1,297,911	-		OKGIIK_05920	0.88	+0.8
1,297,911	-		OKGIIK_05920	0.88	+0.5
1,297,911	-		OKGIIK_05920	0.88	-0.8
1,297,911	-		OKGIIK_05920	0.88	+0.8
1,297,911	-		OKGIIK_05920	0.88	-0.5
1,297,911	-		OKGIIK_05920	0.88	-1.2