Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05900

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,294,349	+				+1.0
1,294,350	-				-1.0
1,294,350	-				-0.8
1,294,398	+				-2.1
1,294,398	+				-0.2
1,294,398	+				+1.4
1,294,398	+				+1.4
1,294,399	-				+0.5
1,294,399	-				+1.2
1,294,399	-				-0.8
1,294,545	+	aHP1	OKGIIK_05900	0.19	+0.8
1,294,545	+	aHP1	OKGIIK_05900	0.19	-0.2
1,294,545	+	aHP1	OKGIIK_05900	0.19	-0.5
1,294,546	-	aHP1	OKGIIK_05900	0.19	-2.2
1,294,546	-	aHP1	OKGIIK_05900	0.19	+0.6
1,294,619	-	aHP1	OKGIIK_05900	0.33	+2.4
1,294,695	+	aHP1	OKGIIK_05900	0.48	+0.7
1,294,695	+	aHP1	OKGIIK_05900	0.48	+0.5
1,294,695	+	aHP1	OKGIIK_05900	0.48	+0.1
1,294,695	+	aHP1	OKGIIK_05900	0.48	+0.4
1,294,695	+	aHP1	OKGIIK_05900	0.48	-1.1
1,294,695	+	aHP1	OKGIIK_05900	0.48	+0.6
1,294,695	+	aHP1	OKGIIK_05900	0.48	-0.6
1,294,695	+	aHP1	OKGIIK_05900	0.48	-1.1
1,294,695	+	aHP1	OKGIIK_05900	0.48	-0.8
1,294,695	+	aHP1	OKGIIK_05900	0.48	-2.3
1,294,695	+	aHP1	OKGIIK_05900	0.48	-0.0
1,294,695	+	aHP1	OKGIIK_05900	0.48	+1.7
1,294,695	+	aHP1	OKGIIK_05900	0.48	+0.5
1,294,695	+	aHP1	OKGIIK_05900	0.48	+0.5
1,294,695	+	aHP1	OKGIIK_05900	0.48	-0.8
1,294,695	+	aHP1	OKGIIK_05900	0.48	+0.2
1,294,695	+	aHP1	OKGIIK_05900	0.48	+0.7
1,294,695	+	aHP1	OKGIIK_05900	0.48	+0.8
1,294,695	+	aHP1	OKGIIK_05900	0.48	+0.5
1,294,696	-	aHP1	OKGIIK_05900	0.48	+0.0
1,294,696	-	aHP1	OKGIIK_05900	0.48	+2.4
1,294,696	-	aHP1	OKGIIK_05900	0.48	-1.1
1,294,696	-	aHP1	OKGIIK_05900	0.48	-0.0
1,294,696	-	aHP1	OKGIIK_05900	0.48	-0.6
1,294,696	-	aHP1	OKGIIK_05900	0.48	+0.0
1,294,696	-	aHP1	OKGIIK_05900	0.48	-1.1
1,294,696	-	aHP1	OKGIIK_05900	0.48	+0.0
1,294,696	-	aHP1	OKGIIK_05900	0.48	+0.9
1,294,696	-	aHP1	OKGIIK_05900	0.48	+0.3
1,294,696	-	aHP1	OKGIIK_05900	0.48	-1.1
1,294,696	-	aHP1	OKGIIK_05900	0.48	+0.7
1,294,696	-	aHP1	OKGIIK_05900	0.48	+0.0
1,294,696	-	aHP1	OKGIIK_05900	0.48	+1.4
1,294,696	-	aHP1	OKGIIK_05900	0.48	+0.4
1,294,696	-	aHP1	OKGIIK_05900	0.48	+0.5
1,294,696	-	aHP1	OKGIIK_05900	0.48	-0.8
1,294,696	-	aHP1	OKGIIK_05900	0.48	+0.8
1,294,696	-	aHP1	OKGIIK_05900	0.48	-1.1
1,294,696	-	aHP1	OKGIIK_05900	0.48	+0.0
1,294,696	-	aHP1	OKGIIK_05900	0.48	-0.5
1,294,696	-	aHP1	OKGIIK_05900	0.48	+0.8
1,294,696	-	aHP1	OKGIIK_05900	0.48	+1.0
1,294,752	+	aHP1	OKGIIK_05900	0.59	+0.4
1,294,753	-	aHP1	OKGIIK_05900	0.59	-0.2
1,294,753	-	aHP1	OKGIIK_05900	0.59	+0.8
1,294,753	-	aHP1	OKGIIK_05900	0.59	+0.8
1,294,753	-	aHP1	OKGIIK_05900	0.59	+0.4
1,294,764	+	aHP1	OKGIIK_05900	0.61	+0.5
1,294,765	-	aHP1	OKGIIK_05900	0.61	-0.6
1,294,765	-	aHP1	OKGIIK_05900	0.61	+0.2
1,294,966	+				+1.0
1,294,966	+				-0.8
1,294,967	-				-0.2
1,294,967	-				-1.8
1,294,967	-				+0.4
1,294,967	-				-0.5
1,295,008	+				+0.3
1,295,008	+				+0.5
1,295,008	+				-0.1
1,295,009	-				+1.2
1,295,009	-				+1.3
1,295,009	-				-0.2
1,295,009	-				-0.7
1,295,009	-				+2.1
1,295,009	-				-0.5
1,295,067	+				+2.0
1,295,067	+				-1.7
1,295,067	+				+0.0
1,295,067	+				-1.7
1,295,067	+				-0.7
1,295,067	+				-0.2
1,295,067	+				+0.4
1,295,067	+				-0.1
1,295,067	+				-0.4
1,295,067	+				+0.0
1,295,067	+				-1.0
1,295,067	+				+0.6
1,295,067	+				-0.8
1,295,067	+				+0.3
1,295,067	+				-0.4
1,295,067	+				+1.0
1,295,067	+				-1.5
1,295,067	+				-1.7
1,295,067	+				-1.0
1,295,067	+				-0.8
1,295,067	+				-0.2
1,295,067	+				-1.9
1,295,068	-				+0.6
1,295,068	-				-0.2
1,295,068	-				+0.5
1,295,068	-				-0.7
1,295,068	-				-0.8
1,295,068	-				+0.6
1,295,068	-				-1.3
1,295,068	-				-2.4
1,295,068	-				+0.0
1,295,068	-				-0.5
1,295,068	-				-1.9
1,295,068	-				-0.5
1,295,068	-				+0.9
1,295,068	-				-1.0
1,295,068	-				-1.2
1,295,068	-				-1.6
1,295,122	-	ibpA	OKGIIK_05905	0.10	+0.0
1,295,252	-	ibpA	OKGIIK_05905	0.39	+0.4
1,295,252	-	ibpA	OKGIIK_05905	0.39	+0.8
1,295,252	-	ibpA	OKGIIK_05905	0.39	-1.0
1,295,395	+	ibpA	OKGIIK_05905	0.70	-0.8
1,295,396	-	ibpA	OKGIIK_05905	0.70	+0.0
1,295,521	-				+0.2
1,295,631	+				-2.0
1,295,643	+				-0.8
1,295,643	+				+0.0
1,295,643	+				-0.7
1,295,643	+				+0.0
1,295,643	+				+0.4
1,295,643	+				-0.2
1,295,643	+				-0.8
1,295,643	+				-0.8
1,295,643	+				+0.3
1,295,643	+				+0.3
1,295,646	+				+1.2
1,295,646	+				-0.2
1,295,700	+				+0.3
1,295,721	+	dnaJ	OKGIIK_05910	0.10	+0.2
1,295,721	+	dnaJ	OKGIIK_05910	0.10	-1.1
1,295,721	+	dnaJ	OKGIIK_05910	0.10	-0.2
1,295,721	+	dnaJ	OKGIIK_05910	0.10	-1.1
1,295,721	+	dnaJ	OKGIIK_05910	0.10	-1.0
1,295,721	+	dnaJ	OKGIIK_05910	0.10	-1.2
1,295,721	+	dnaJ	OKGIIK_05910	0.10	-1.2
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-1.4
1,295,722	-	dnaJ	OKGIIK_05910	0.10	+0.2
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-0.2
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-2.2
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-0.2
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-0.7
1,295,722	-	dnaJ	OKGIIK_05910	0.10	+0.2
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-0.2
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-0.4
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-1.7
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-2.6
1,295,722	-	dnaJ	OKGIIK_05910	0.10	+1.1
1,295,722	-	dnaJ	OKGIIK_05910	0.10	+0.3
1,295,722	-	dnaJ	OKGIIK_05910	0.10	+0.2
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-1.5
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-1.1
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-0.6
1,295,722	-	dnaJ	OKGIIK_05910	0.10	+1.3
1,295,722	-	dnaJ	OKGIIK_05910	0.10	-1.7
1,295,820	+	dnaJ	OKGIIK_05910	0.21	+0.6
1,295,820	+	dnaJ	OKGIIK_05910	0.21	+0.3
1,295,820	+	dnaJ	OKGIIK_05910	0.21	+1.3
1,295,820	+	dnaJ	OKGIIK_05910	0.21	+0.8
1,295,820	+	dnaJ	OKGIIK_05910	0.21	-1.8
1,295,820	+	dnaJ	OKGIIK_05910	0.21	+0.1
1,295,821	-	dnaJ	OKGIIK_05910	0.22	+0.3
1,295,821	-	dnaJ	OKGIIK_05910	0.22	-0.2
1,295,821	-	dnaJ	OKGIIK_05910	0.22	-0.6
1,295,821	-	dnaJ	OKGIIK_05910	0.22	-0.8
1,295,821	-	dnaJ	OKGIIK_05910	0.22	-1.4
1,295,821	-	dnaJ	OKGIIK_05910	0.22	-2.4