Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05620

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,238,338	+	hutH	OKGIIK_05610	0.76	+0.0
1,238,338	+	hutH	OKGIIK_05610	0.76	+1.2
1,238,338	+	hutH	OKGIIK_05610	0.76	-0.1
1,238,338	+	hutH	OKGIIK_05610	0.76	-0.7
1,238,338	+	hutH	OKGIIK_05610	0.76	+0.3
1,238,338	+	hutH	OKGIIK_05610	0.76	-0.5
1,238,338	+	hutH	OKGIIK_05610	0.76	+0.7
1,238,339	-	hutH	OKGIIK_05610	0.77	-0.5
1,238,339	-	hutH	OKGIIK_05610	0.77	-2.1
1,238,339	-	hutH	OKGIIK_05610	0.77	+2.2
1,238,339	-	hutH	OKGIIK_05610	0.77	+1.8
1,238,339	-	hutH	OKGIIK_05610	0.77	-0.9
1,238,339	-	hutH	OKGIIK_05610	0.77	+0.9
1,238,339	-	hutH	OKGIIK_05610	0.77	+0.9
1,238,452	+	hutH	OKGIIK_05610	0.82	-0.7
1,238,452	+	hutH	OKGIIK_05610	0.82	+0.8
1,238,452	+	hutH	OKGIIK_05610	0.82	-0.3
1,238,452	+	hutH	OKGIIK_05610	0.82	-0.8
1,238,452	+	hutH	OKGIIK_05610	0.82	-0.1
1,238,452	+	hutH	OKGIIK_05610	0.82	-0.6
1,238,452	+	hutH	OKGIIK_05610	0.82	+0.2
1,238,453	-	hutH	OKGIIK_05610	0.83	+0.0
1,238,453	-	hutH	OKGIIK_05610	0.83	+1.0
1,238,453	-	hutH	OKGIIK_05610	0.83	-0.5
1,238,453	-	hutH	OKGIIK_05610	0.83	+0.6
1,238,453	-	hutH	OKGIIK_05610	0.83	+1.3
1,238,453	-	hutH	OKGIIK_05610	0.83	-1.0
1,238,582	-	hutH	OKGIIK_05610	0.89	+0.3
1,239,107	+		OKGIIK_05615	0.74	-1.1
1,239,107	+		OKGIIK_05615	0.74	-1.1
1,239,107	+		OKGIIK_05615	0.74	-0.3
1,239,107	+		OKGIIK_05615	0.74	-0.5
1,239,107	+		OKGIIK_05615	0.74	-2.5
1,239,107	+		OKGIIK_05615	0.74	-1.3
1,239,107	+		OKGIIK_05615	0.74	-0.7
1,239,108	-		OKGIIK_05615	0.74	-1.3
1,239,108	-		OKGIIK_05615	0.74	+0.7
1,239,108	-		OKGIIK_05615	0.74	-0.7
1,239,108	-		OKGIIK_05615	0.74	-1.4
1,239,108	-		OKGIIK_05615	0.74	+1.1
1,239,108	-		OKGIIK_05615	0.74	-1.1
1,239,198	-				+0.0
1,239,223	-				-0.5
1,239,295	+				-0.8
1,239,295	+				-0.2
1,239,295	+				-2.0
1,239,295	+				+0.3
1,239,295	+				+0.3
1,239,295	+				+1.3
1,239,295	+				+1.5
1,239,295	+				-0.5
1,239,328	+				+0.7
1,239,328	+				-0.3
1,239,445	+	rfaF	OKGIIK_05620	0.14	+0.6
1,239,445	+	rfaF	OKGIIK_05620	0.14	-0.3
1,239,445	+	rfaF	OKGIIK_05620	0.14	-1.1
1,239,445	+	rfaF	OKGIIK_05620	0.14	+0.5
1,239,445	+	rfaF	OKGIIK_05620	0.14	-2.1
1,239,445	+	rfaF	OKGIIK_05620	0.14	-0.3
1,239,446	-	rfaF	OKGIIK_05620	0.14	+1.3
1,239,446	-	rfaF	OKGIIK_05620	0.14	+0.3
1,239,446	-	rfaF	OKGIIK_05620	0.14	-0.3
1,239,446	-	rfaF	OKGIIK_05620	0.14	+0.6
1,239,446	-	rfaF	OKGIIK_05620	0.14	-0.7
1,239,446	-	rfaF	OKGIIK_05620	0.14	-0.6
1,239,446	-	rfaF	OKGIIK_05620	0.14	-0.7
1,239,475	+	rfaF	OKGIIK_05620	0.17	-0.7
1,239,475	+	rfaF	OKGIIK_05620	0.17	-0.5
1,239,476	-	rfaF	OKGIIK_05620	0.17	+0.7
1,239,476	-	rfaF	OKGIIK_05620	0.17	-1.1
1,239,757	+	rfaF	OKGIIK_05620	0.44	+0.2
1,239,757	+	rfaF	OKGIIK_05620	0.44	+0.2
1,239,758	-	rfaF	OKGIIK_05620	0.44	-1.0
1,240,365	-				+0.4
1,240,365	-				-0.5
1,240,365	-				+0.3
1,240,365	-				-0.3
1,240,487	+		OKGIIK_05625	0.14	+0.8
1,240,487	+		OKGIIK_05625	0.14	-2.8
1,240,488	-		OKGIIK_05625	0.14	-0.3
1,240,488	-		OKGIIK_05625	0.14	-0.3
1,240,583	+		OKGIIK_05625	0.27	-0.1
1,240,583	+		OKGIIK_05625	0.27	-0.5
1,240,583	+		OKGIIK_05625	0.27	-0.4
1,240,584	-		OKGIIK_05625	0.27	+0.3
1,240,584	-		OKGIIK_05625	0.27	+1.0
1,240,625	+		OKGIIK_05625	0.32	-0.5
1,240,730	+		OKGIIK_05625	0.47	-0.3
1,240,730	+		OKGIIK_05625	0.47	-0.4
1,240,730	+		OKGIIK_05625	0.47	-2.3
1,240,730	+		OKGIIK_05625	0.47	-1.4
1,240,730	+		OKGIIK_05625	0.47	-0.3
1,240,731	-		OKGIIK_05625	0.47	+0.3
1,240,751	+		OKGIIK_05625	0.50	-0.3
1,240,752	-		OKGIIK_05625	0.50	-1.6
1,240,752	-		OKGIIK_05625	0.50	-1.0
1,240,752	-		OKGIIK_05625	0.50	-1.0
1,240,752	-		OKGIIK_05625	0.50	-1.0
1,240,861	-		OKGIIK_05625	0.65	-1.5
1,240,937	+		OKGIIK_05625	0.75	-1.7
1,240,937	+		OKGIIK_05625	0.75	+0.7
1,240,937	+		OKGIIK_05625	0.75	+0.0
1,240,937	+		OKGIIK_05625	0.75	+0.3
1,240,937	+		OKGIIK_05625	0.75	-1.4
1,240,937	+		OKGIIK_05625	0.75	+0.0
1,240,937	+		OKGIIK_05625	0.75	+0.3
1,240,937	+		OKGIIK_05625	0.75	+0.3
1,240,937	+		OKGIIK_05625	0.75	-0.5
1,240,938	-		OKGIIK_05625	0.75	-0.7
1,240,938	-		OKGIIK_05625	0.75	+0.0
1,241,090	+				+0.7
1,241,090	+				+1.3
1,241,090	+				+0.3
1,241,090	+				+0.3
1,241,090	+				-1.3
1,241,090	+				-1.9
1,241,090	+				-0.8
1,241,090	+				-0.4
1,241,091	-				-0.8
1,241,091	-				+0.6
1,241,091	-				-0.3
1,241,097	-				-1.4
1,241,104	+				-0.0
1,241,104	+				+0.0
1,241,104	+				-0.7
1,241,248	+	elaC	OKGIIK_05630	0.17	-0.8
1,241,249	-	elaC	OKGIIK_05630	0.18	+0.0
1,241,249	-	elaC	OKGIIK_05630	0.18	+0.3
1,241,261	-	elaC	OKGIIK_05630	0.19	-0.8