Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05565

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,223,300	+		OKGIIK_05560	0.49	+0.6
1,223,300	+		OKGIIK_05560	0.49	+0.6
1,223,300	+		OKGIIK_05560	0.49	-1.6
1,223,300	+		OKGIIK_05560	0.49	-1.0
1,223,300	+		OKGIIK_05560	0.49	+0.6
1,223,300	+		OKGIIK_05560	0.49	-0.4
1,223,300	+		OKGIIK_05560	0.49	-0.4
1,223,301	-		OKGIIK_05560	0.49	-1.6
1,223,321	+		OKGIIK_05560	0.51	-1.0
1,223,321	+		OKGIIK_05560	0.51	-0.3
1,223,321	+		OKGIIK_05560	0.51	-1.0
1,223,874	+				-1.2
1,223,874	+				-0.0
1,223,874	+				-0.6
1,223,874	+				-1.7
1,223,874	+				-0.7
1,223,874	+				-0.7
1,223,874	+				-1.4
1,223,874	+				-1.4
1,223,874	+				-1.7
1,223,874	+				-1.2
1,223,874	+				-0.7
1,223,874	+				-1.4
1,223,874	+				-0.4
1,223,874	+				-2.3
1,223,874	+				-1.1
1,223,874	+				-1.9
1,223,874	+				-1.0
1,223,874	+				-2.0
1,223,874	+				-0.4
1,223,875	-				-0.4
1,223,875	-				-1.0
1,223,875	-				+0.6
1,223,875	-				+0.2
1,223,875	-				-1.4
1,223,875	-				-2.9
1,223,875	-				-0.7
1,223,875	-				-0.7
1,223,875	-				-1.2
1,223,875	-				-0.6
1,223,875	-				-0.7
1,223,875	-				-0.9
1,223,875	-				-1.2
1,223,875	-				-1.6
1,223,875	-				+0.1
1,223,875	-				-0.4
1,223,875	-				+0.6
1,223,875	-				-1.0
1,223,875	-				-1.2
1,223,875	-				-1.9
1,223,875	-				+0.6
1,223,875	-				-1.2
1,223,875	-				-1.0
1,223,875	-				-0.7
1,223,890	+				-2.1
1,223,890	+				-1.0
1,223,890	+				-0.7
1,223,890	+				+0.3
1,223,890	+				-0.7
1,223,891	-				+0.3
1,223,891	-				-0.7
1,223,891	-				-0.3
1,223,891	-				+0.8
1,224,045	+		OKGIIK_05565	0.29	-1.0
1,224,045	+		OKGIIK_05565	0.29	-0.4
1,224,045	+		OKGIIK_05565	0.29	-0.4
1,224,045	+		OKGIIK_05565	0.29	-1.0
1,224,045	+		OKGIIK_05565	0.29	-1.0
1,224,045	+		OKGIIK_05565	0.29	-1.9
1,224,045	+		OKGIIK_05565	0.29	-2.2
1,224,045	+		OKGIIK_05565	0.29	-1.0
1,224,045	+		OKGIIK_05565	0.29	-0.5
1,224,045	+		OKGIIK_05565	0.29	-0.4
1,224,046	-		OKGIIK_05565	0.30	-0.7
1,224,046	-		OKGIIK_05565	0.30	-0.4
1,224,046	-		OKGIIK_05565	0.30	-1.0
1,224,046	-		OKGIIK_05565	0.30	-0.4
1,224,046	-		OKGIIK_05565	0.30	-1.6
1,224,046	-		OKGIIK_05565	0.30	-1.4
1,224,046	-		OKGIIK_05565	0.30	-1.4
1,224,046	-		OKGIIK_05565	0.30	-0.7
1,224,046	-		OKGIIK_05565	0.30	-0.4
1,224,046	-		OKGIIK_05565	0.30	-1.0
1,224,046	-		OKGIIK_05565	0.30	-0.7
1,224,046	-		OKGIIK_05565	0.30	-0.2
1,224,046	-		OKGIIK_05565	0.30	-1.0
1,224,046	-		OKGIIK_05565	0.30	-0.7
1,224,333	+		OKGIIK_05565	0.75	-0.7
1,224,333	+		OKGIIK_05565	0.75	-0.4
1,224,333	+		OKGIIK_05565	0.75	-1.1
1,224,333	+		OKGIIK_05565	0.75	-2.6
1,224,333	+		OKGIIK_05565	0.75	-1.2
1,224,333	+		OKGIIK_05565	0.75	-1.0
1,224,333	+		OKGIIK_05565	0.75	-0.4
1,224,333	+		OKGIIK_05565	0.75	-1.2
1,224,333	+		OKGIIK_05565	0.75	-0.4
1,224,333	+		OKGIIK_05565	0.75	+0.6
1,224,333	+		OKGIIK_05565	0.75	-1.0
1,224,333	+		OKGIIK_05565	0.75	-1.0
1,224,333	+		OKGIIK_05565	0.75	-1.2
1,224,333	+		OKGIIK_05565	0.75	-0.7
1,224,333	+		OKGIIK_05565	0.75	-0.7
1,224,333	+		OKGIIK_05565	0.75	+0.1
1,224,333	+		OKGIIK_05565	0.75	-3.2
1,224,333	+		OKGIIK_05565	0.75	-1.7
1,224,333	+		OKGIIK_05565	0.75	-0.4
1,224,333	+		OKGIIK_05565	0.75	-0.7
1,224,333	+		OKGIIK_05565	0.75	-0.0
1,224,333	+		OKGIIK_05565	0.75	-1.3
1,224,333	+		OKGIIK_05565	0.75	-0.4
1,224,333	+		OKGIIK_05565	0.75	-3.2
1,224,333	+		OKGIIK_05565	0.75	-0.4
1,224,333	+		OKGIIK_05565	0.75	+1.2
1,224,334	-		OKGIIK_05565	0.75	-1.5
1,224,334	-		OKGIIK_05565	0.75	-0.4
1,224,334	-		OKGIIK_05565	0.75	+0.8
1,224,334	-		OKGIIK_05565	0.75	+0.4
1,224,334	-		OKGIIK_05565	0.75	-0.6
1,224,334	-		OKGIIK_05565	0.75	-0.4
1,224,334	-		OKGIIK_05565	0.75	+0.6
1,224,334	-		OKGIIK_05565	0.75	-2.1
1,224,334	-		OKGIIK_05565	0.75	-1.0
1,224,334	-		OKGIIK_05565	0.75	-1.9
1,224,334	-		OKGIIK_05565	0.75	+0.6
1,224,334	-		OKGIIK_05565	0.75	-2.0
1,224,334	-		OKGIIK_05565	0.75	-0.4
1,224,334	-		OKGIIK_05565	0.75	-1.2
1,224,334	-		OKGIIK_05565	0.75	-0.0
1,224,334	-		OKGIIK_05565	0.75	+0.6
1,224,334	-		OKGIIK_05565	0.75	-1.0
1,224,334	-		OKGIIK_05565	0.75	-0.0
1,224,334	-		OKGIIK_05565	0.75	-0.2
1,224,334	-		OKGIIK_05565	0.75	-1.0
1,224,334	-		OKGIIK_05565	0.75	-0.7
1,224,334	-		OKGIIK_05565	0.75	-1.7
1,224,334	-		OKGIIK_05565	0.75	-0.4
1,224,334	-		OKGIIK_05565	0.75	-0.4
1,224,334	-		OKGIIK_05565	0.75	-1.0
1,224,334	-		OKGIIK_05565	0.75	-1.7
1,224,334	-		OKGIIK_05565	0.75	+0.2
1,224,493	+				-1.5
1,224,493	+				-0.4
1,224,493	+				+0.8
1,224,493	+				-2.9
1,224,493	+				-0.0
1,224,493	+				-0.2
1,224,493	+				+0.3
1,224,493	+				-0.7
1,224,493	+				+1.2
1,224,493	+				-1.2
1,224,493	+				-0.5
1,224,493	+				-1.0
1,224,493	+				+0.3
1,224,493	+				-1.0
1,224,493	+				-2.1
1,224,493	+				-0.7
1,224,493	+				-2.1
1,224,493	+				-0.4
1,224,493	+				-2.5
1,224,493	+				-2.2
1,224,493	+				+0.3
1,224,493	+				-3.2
1,224,493	+				-0.7
1,224,493	+				-1.5
1,224,493	+				-2.0
1,224,493	+				-1.7
1,224,493	+				-0.1
1,224,493	+				-0.0
1,224,493	+				-0.7
1,224,493	+				-1.7
1,224,494	-				+2.2
1,224,494	-				-0.2
1,224,494	-				-0.2
1,224,494	-				-1.0
1,224,494	-				-0.9
1,224,494	-				-0.4
1,224,494	-				-0.4
1,224,494	-				-0.4
1,224,494	-				-1.0
1,224,494	-				-0.0
1,224,494	-				-0.7
1,224,494	-				-0.4
1,224,494	-				-0.4
1,224,494	-				-3.3
1,224,494	-				-1.6
1,224,571	+				-0.5
1,224,571	+				-1.0
1,224,571	+				-0.7
1,224,571	+				+0.6
1,224,571	+				-0.7
1,224,572	-				+0.8
1,224,784	+	purF	OKGIIK_05570	0.18	-1.5
1,224,784	+	purF	OKGIIK_05570	0.18	-0.4
1,224,784	+	purF	OKGIIK_05570	0.18	-0.6
1,224,785	-	purF	OKGIIK_05570	0.18	-0.7
1,224,785	-	purF	OKGIIK_05570	0.18	-0.2
1,224,785	-	purF	OKGIIK_05570	0.18	+0.6
1,224,785	-	purF	OKGIIK_05570	0.18	-1.0
1,224,799	+	purF	OKGIIK_05570	0.19	-0.1
1,225,018	+	purF	OKGIIK_05570	0.34	-1.0
1,225,282	+	purF	OKGIIK_05570	0.52	-0.4
1,225,282	+	purF	OKGIIK_05570	0.52	+0.4
1,225,282	+	purF	OKGIIK_05570	0.52	-1.0
1,225,283	-	purF	OKGIIK_05570	0.52	-0.7
1,225,283	-	purF	OKGIIK_05570	0.52	-0.4
1,225,283	-	purF	OKGIIK_05570	0.52	+0.8
1,225,288	+	purF	OKGIIK_05570	0.52	-0.4
1,225,289	-	purF	OKGIIK_05570	0.52	+0.8
1,225,289	-	purF	OKGIIK_05570	0.52	-2.2
1,225,289	-	purF	OKGIIK_05570	0.52	-0.4
1,225,330	+	purF	OKGIIK_05570	0.55	-1.2
1,225,330	+	purF	OKGIIK_05570	0.55	-2.1
1,225,331	-	purF	OKGIIK_05570	0.55	-0.4
1,225,331	-	purF	OKGIIK_05570	0.55	-1.6
1,225,331	-	purF	OKGIIK_05570	0.55	-0.4