Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05380

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,174,263	+		OKGIIK_05370	0.85	-0.5
1,174,351	+		OKGIIK_05370	0.89	+0.1
1,174,351	+		OKGIIK_05370	0.89	+0.6
1,174,352	-		OKGIIK_05370	0.89	-1.4
1,174,453	+				-1.1
1,174,454	-				+1.7
1,174,630	+				-2.6
1,174,630	+				-1.6
1,174,630	+				+2.6
1,174,631	-				-1.1
1,174,631	-				-0.5
1,174,760	+		OKGIIK_05375	0.27	-0.3
1,175,016	+		OKGIIK_05375	0.75	-2.4
1,175,016	+		OKGIIK_05375	0.75	-1.5
1,175,016	+		OKGIIK_05375	0.75	-1.6
1,175,016	+		OKGIIK_05375	0.75	-2.3
1,175,016	+		OKGIIK_05375	0.75	+0.5
1,175,016	+		OKGIIK_05375	0.75	-0.9
1,175,024	+		OKGIIK_05375	0.76	-0.4
1,175,024	+		OKGIIK_05375	0.76	+0.4
1,175,024	+		OKGIIK_05375	0.76	-0.4
1,175,024	+		OKGIIK_05375	0.76	-0.6
1,175,024	+		OKGIIK_05375	0.76	+0.4
1,175,024	+		OKGIIK_05375	0.76	-1.4
1,175,025	-		OKGIIK_05375	0.76	+1.3
1,175,109	+				+0.1
1,175,110	-				-1.1
1,175,110	-				-0.3
1,175,307	+				-0.7
1,175,308	-				+1.2
1,175,308	-				+1.5
1,175,308	-				+1.5
1,175,377	-	modA	OKGIIK_05380	0.18	-0.0
1,175,377	-	modA	OKGIIK_05380	0.18	-0.7
1,175,458	-	modA	OKGIIK_05380	0.27	-0.7
1,175,631	+	modA	OKGIIK_05380	0.48	-0.5
1,175,631	+	modA	OKGIIK_05380	0.48	+0.6
1,175,631	+	modA	OKGIIK_05380	0.48	-1.5
1,175,632	-	modA	OKGIIK_05380	0.48	-0.6
1,175,632	-	modA	OKGIIK_05380	0.48	+1.0
1,175,737	+	modA	OKGIIK_05380	0.61	+1.3
1,175,738	-	modA	OKGIIK_05380	0.61	-1.0
1,175,738	-	modA	OKGIIK_05380	0.61	+0.4
1,175,765	+	modA	OKGIIK_05380	0.64	-0.0
1,175,765	+	modA	OKGIIK_05380	0.64	-0.3
1,175,765	+	modA	OKGIIK_05380	0.64	-0.7
1,175,766	-	modA	OKGIIK_05380	0.64	-0.9
1,175,766	-	modA	OKGIIK_05380	0.64	-2.3
1,175,832	+	modA	OKGIIK_05380	0.72	-1.0
1,175,832	+	modA	OKGIIK_05380	0.72	-0.7
1,175,833	-	modA	OKGIIK_05380	0.72	+0.7
1,175,833	-	modA	OKGIIK_05380	0.72	-0.9
1,175,833	-	modA	OKGIIK_05380	0.72	+0.3
1,175,833	-	modA	OKGIIK_05380	0.72	+1.1
1,175,833	-	modA	OKGIIK_05380	0.72	+1.7
1,175,925	+	modA	OKGIIK_05380	0.83	+0.1
1,175,926	-	modA	OKGIIK_05380	0.83	+0.1
1,175,926	-	modA	OKGIIK_05380	0.83	-0.5
1,175,974	-	modA	OKGIIK_05380	0.89	+1.1
1,175,974	-	modA	OKGIIK_05380	0.89	+0.3
1,176,064	+				-0.0
1,176,064	+				-0.1
1,176,064	+				-1.6
1,176,065	-				-1.1
1,176,065	-				+0.1
1,176,091	+				-0.7
1,176,091	+				-0.1
1,176,091	+				-0.3
1,176,091	+				-0.9
1,176,091	+				-3.2
1,176,091	+				+0.3
1,176,091	+				-0.5
1,176,092	-				-0.9
1,176,140	+				+0.1
1,176,141	-				-0.1
1,176,141	-				+0.3
1,176,141	-				-0.0
1,176,176	+				+2.1
1,176,177	-				-0.3
1,176,177	-				+0.4
1,176,177	-				-0.5
1,176,177	-				-0.0
1,176,246	-				-0.9
1,176,270	+				+0.3
1,176,270	+				-2.6
1,176,270	+				-0.4
1,176,270	+				+0.9
1,176,271	-				-2.3
1,176,271	-				-0.1
1,176,271	-				-0.3
1,176,271	-				+1.1
1,176,271	-				+0.7
1,176,271	-				-1.0
1,176,272	+				+1.5
1,176,272	+				-0.0
1,176,273	-				-0.3
1,176,273	-				-0.9
1,176,326	+		OKGIIK_05385	0.12	+1.3
1,176,326	+		OKGIIK_05385	0.12	+0.7
1,176,326	+		OKGIIK_05385	0.12	-0.0
1,176,326	+		OKGIIK_05385	0.12	+0.1
1,176,326	+		OKGIIK_05385	0.12	-1.5
1,176,326	+		OKGIIK_05385	0.12	+1.9
1,176,326	+		OKGIIK_05385	0.12	+0.2
1,176,326	+		OKGIIK_05385	0.12	+1.5
1,176,326	+		OKGIIK_05385	0.12	-0.0
1,176,326	+		OKGIIK_05385	0.12	-1.8
1,176,326	+		OKGIIK_05385	0.12	-1.4
1,176,326	+		OKGIIK_05385	0.12	+0.7
1,176,326	+		OKGIIK_05385	0.12	+1.0
1,176,327	-		OKGIIK_05385	0.13	+0.2
1,176,327	-		OKGIIK_05385	0.13	-2.7
1,176,327	-		OKGIIK_05385	0.13	-2.6
1,176,327	-		OKGIIK_05385	0.13	-0.6
1,176,327	-		OKGIIK_05385	0.13	-1.5
1,176,327	-		OKGIIK_05385	0.13	-1.1
1,176,327	-		OKGIIK_05385	0.13	-0.7
1,176,327	-		OKGIIK_05385	0.13	-0.9
1,176,327	-		OKGIIK_05385	0.13	+0.4
1,176,327	-		OKGIIK_05385	0.13	+1.6
1,176,372	-		OKGIIK_05385	0.15	-0.0
1,176,383	-		OKGIIK_05385	0.15	-0.4
1,176,383	-		OKGIIK_05385	0.15	-0.7
1,176,383	-		OKGIIK_05385	0.15	+0.7
1,176,393	+		OKGIIK_05385	0.16	+0.3
1,176,394	-		OKGIIK_05385	0.16	-0.7
1,176,484	+		OKGIIK_05385	0.20	+1.1
1,176,484	+		OKGIIK_05385	0.20	-1.8
1,176,520	+		OKGIIK_05385	0.22	-2.3
1,176,521	-		OKGIIK_05385	0.22	-0.0
1,176,521	-		OKGIIK_05385	0.22	-1.9
1,176,581	+		OKGIIK_05385	0.24	+0.3
1,176,581	+		OKGIIK_05385	0.24	-0.0
1,176,581	+		OKGIIK_05385	0.24	-0.3
1,176,581	+		OKGIIK_05385	0.24	-1.5
1,176,581	+		OKGIIK_05385	0.24	-0.5
1,176,581	+		OKGIIK_05385	0.24	-1.6
1,176,581	+		OKGIIK_05385	0.24	+1.9
1,176,581	+		OKGIIK_05385	0.24	-0.4
1,176,581	+		OKGIIK_05385	0.24	-1.6
1,176,582	-		OKGIIK_05385	0.24	-0.4
1,176,582	-		OKGIIK_05385	0.24	-0.0
1,176,582	-		OKGIIK_05385	0.24	-0.1
1,176,582	-		OKGIIK_05385	0.24	-1.5
1,176,582	-		OKGIIK_05385	0.24	-0.2
1,176,647	+		OKGIIK_05385	0.28	-0.9
1,176,647	+		OKGIIK_05385	0.28	-0.4
1,176,648	-		OKGIIK_05385	0.28	-0.7
1,176,648	-		OKGIIK_05385	0.28	-0.7
1,176,648	-		OKGIIK_05385	0.28	+0.8
1,176,733	+		OKGIIK_05385	0.32	-0.6
1,176,733	+		OKGIIK_05385	0.32	-1.6
1,176,733	+		OKGIIK_05385	0.32	+0.5
1,176,733	+		OKGIIK_05385	0.32	-1.5
1,176,733	+		OKGIIK_05385	0.32	-0.8
1,176,734	-		OKGIIK_05385	0.32	-1.6
1,176,734	-		OKGIIK_05385	0.32	+1.3
1,176,734	-		OKGIIK_05385	0.32	-0.3
1,176,734	-		OKGIIK_05385	0.32	-0.1
1,176,734	-		OKGIIK_05385	0.32	+0.7
1,176,734	-		OKGIIK_05385	0.32	-0.9
1,176,734	-		OKGIIK_05385	0.32	-1.8
1,176,734	-		OKGIIK_05385	0.32	-2.6
1,176,746	+		OKGIIK_05385	0.32	-1.5
1,176,746	+		OKGIIK_05385	0.32	-0.6
1,176,755	+		OKGIIK_05385	0.33	-0.0
1,176,755	+		OKGIIK_05385	0.33	-1.6
1,176,755	+		OKGIIK_05385	0.33	-0.9
1,176,755	+		OKGIIK_05385	0.33	-0.0
1,176,756	-		OKGIIK_05385	0.33	-0.2
1,176,782	+		OKGIIK_05385	0.34	-0.0
1,176,782	+		OKGIIK_05385	0.34	-2.5
1,176,782	+		OKGIIK_05385	0.34	-0.1
1,176,783	-		OKGIIK_05385	0.34	-1.5
1,176,783	-		OKGIIK_05385	0.34	-1.6
1,176,783	-		OKGIIK_05385	0.34	-0.3
1,176,783	-		OKGIIK_05385	0.34	-0.0
1,176,821	+		OKGIIK_05385	0.36	-0.5
1,176,822	-		OKGIIK_05385	0.36	-1.8
1,176,822	-		OKGIIK_05385	0.36	-0.9
1,176,851	+		OKGIIK_05385	0.37	-1.7
1,176,851	+		OKGIIK_05385	0.37	+0.7
1,176,851	+		OKGIIK_05385	0.37	-1.6
1,176,852	-		OKGIIK_05385	0.37	-0.1
1,176,852	-		OKGIIK_05385	0.37	+2.3
1,176,893	-		OKGIIK_05385	0.39	-1.1
1,177,060	+		OKGIIK_05385	0.47	+0.4
1,177,060	+		OKGIIK_05385	0.47	-0.3
1,177,060	+		OKGIIK_05385	0.47	+0.6
1,177,060	+		OKGIIK_05385	0.47	+1.3
1,177,061	-		OKGIIK_05385	0.47	+0.5
1,177,061	-		OKGIIK_05385	0.47	-1.8
1,177,061	-		OKGIIK_05385	0.47	-1.0
1,177,061	-		OKGIIK_05385	0.47	-0.8
1,177,064	+		OKGIIK_05385	0.47	+1.6
1,177,064	+		OKGIIK_05385	0.47	-2.6
1,177,064	+		OKGIIK_05385	0.47	+0.3
1,177,064	+		OKGIIK_05385	0.47	+1.0
1,177,064	+		OKGIIK_05385	0.47	-1.3
1,177,064	+		OKGIIK_05385	0.47	-0.9
1,177,064	+		OKGIIK_05385	0.47	-0.4
1,177,064	+		OKGIIK_05385	0.47	-1.4