Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05310

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,159,799	+	narH	OKGIIK_05305	0.39	-0.4
1,159,799	+	narH	OKGIIK_05305	0.39	-0.0
1,159,880	+	narH	OKGIIK_05305	0.44	-0.0
1,159,880	+	narH	OKGIIK_05305	0.44	-2.0
1,159,881	-	narH	OKGIIK_05305	0.44	+1.3
1,159,892	+	narH	OKGIIK_05305	0.45	-0.0
1,159,892	+	narH	OKGIIK_05305	0.45	-0.0
1,159,892	+	narH	OKGIIK_05305	0.45	-1.5
1,159,892	+	narH	OKGIIK_05305	0.45	+1.6
1,159,892	+	narH	OKGIIK_05305	0.45	-1.3
1,159,892	+	narH	OKGIIK_05305	0.45	+0.3
1,159,893	-	narH	OKGIIK_05305	0.45	-0.9
1,159,893	-	narH	OKGIIK_05305	0.45	-0.5
1,159,893	-	narH	OKGIIK_05305	0.45	-2.7
1,159,893	-	narH	OKGIIK_05305	0.45	-1.3
1,159,895	+	narH	OKGIIK_05305	0.45	+1.3
1,159,895	+	narH	OKGIIK_05305	0.45	+0.1
1,159,896	-	narH	OKGIIK_05305	0.45	-0.0
1,159,896	-	narH	OKGIIK_05305	0.45	-2.1
1,159,896	-	narH	OKGIIK_05305	0.45	+1.4
1,159,896	-	narH	OKGIIK_05305	0.45	-0.5
1,159,896	-	narH	OKGIIK_05305	0.45	+1.0
1,159,937	+	narH	OKGIIK_05305	0.48	+1.0
1,160,000	+	narH	OKGIIK_05305	0.52	+0.3
1,160,001	-	narH	OKGIIK_05305	0.52	-1.1
1,160,018	+	narH	OKGIIK_05305	0.53	-0.9
1,160,018	+	narH	OKGIIK_05305	0.53	-1.9
1,160,019	-	narH	OKGIIK_05305	0.53	-0.0
1,160,019	-	narH	OKGIIK_05305	0.53	-1.6
1,160,019	-	narH	OKGIIK_05305	0.53	+0.1
1,160,072	+	narH	OKGIIK_05305	0.57	-0.0
1,160,072	+	narH	OKGIIK_05305	0.57	+1.3
1,160,072	+	narH	OKGIIK_05305	0.57	-0.9
1,160,073	-	narH	OKGIIK_05305	0.57	-1.3
1,160,073	-	narH	OKGIIK_05305	0.57	-0.7
1,160,073	-	narH	OKGIIK_05305	0.57	+1.1
1,160,186	+	narH	OKGIIK_05305	0.64	-0.9
1,160,187	-	narH	OKGIIK_05305	0.64	-1.2
1,160,187	-	narH	OKGIIK_05305	0.64	-0.5
1,160,187	-	narH	OKGIIK_05305	0.64	-1.8
1,160,187	-	narH	OKGIIK_05305	0.64	-0.0
1,160,234	+	narH	OKGIIK_05305	0.67	+0.9
1,160,258	+	narH	OKGIIK_05305	0.69	-0.7
1,160,258	+	narH	OKGIIK_05305	0.69	+0.9
1,160,258	+	narH	OKGIIK_05305	0.69	+1.3
1,160,258	+	narH	OKGIIK_05305	0.69	-0.3
1,160,258	+	narH	OKGIIK_05305	0.69	-1.8
1,160,258	+	narH	OKGIIK_05305	0.69	-0.4
1,160,258	+	narH	OKGIIK_05305	0.69	-0.7
1,160,258	+	narH	OKGIIK_05305	0.69	-0.5
1,160,259	-	narH	OKGIIK_05305	0.69	-0.7
1,160,525	+	narH	OKGIIK_05305	0.86	+0.3
1,160,525	+	narH	OKGIIK_05305	0.86	-0.1
1,160,526	-	narH	OKGIIK_05305	0.86	-1.4
1,160,526	-	narH	OKGIIK_05305	0.86	-1.0
1,160,531	+	narH	OKGIIK_05305	0.86	+1.3
1,160,549	+	narH	OKGIIK_05305	0.87	+1.3
1,160,549	+	narH	OKGIIK_05305	0.87	-0.1
1,160,550	-	narH	OKGIIK_05305	0.87	-2.4
1,160,588	+	narH	OKGIIK_05305	0.90	+1.9
1,160,588	+	narH	OKGIIK_05305	0.90	-0.8
1,160,696	+				+0.3
1,160,696	+				-0.3
1,160,696	+				-1.7
1,160,696	+				-1.3
1,160,697	-				-0.8
1,160,697	-				-0.9
1,160,973	+	narJ	OKGIIK_05310	0.34	-0.4
1,160,973	+	narJ	OKGIIK_05310	0.34	+1.3
1,160,973	+	narJ	OKGIIK_05310	0.34	-0.3
1,160,973	+	narJ	OKGIIK_05310	0.34	+1.0
1,160,974	-	narJ	OKGIIK_05310	0.34	+1.6
1,160,974	-	narJ	OKGIIK_05310	0.34	-0.4
1,160,974	-	narJ	OKGIIK_05310	0.34	+1.2
1,160,974	-	narJ	OKGIIK_05310	0.34	+1.7
1,161,028	+	narJ	OKGIIK_05310	0.42	-1.8
1,161,028	+	narJ	OKGIIK_05310	0.42	+0.7
1,161,073	+	narJ	OKGIIK_05310	0.49	+1.3
1,161,122	+	narJ	OKGIIK_05310	0.56	+0.7
1,161,122	+	narJ	OKGIIK_05310	0.56	+1.0
1,161,122	+	narJ	OKGIIK_05310	0.56	-0.9
1,161,122	+	narJ	OKGIIK_05310	0.56	-1.0
1,161,123	-	narJ	OKGIIK_05310	0.56	-0.7
1,161,123	-	narJ	OKGIIK_05310	0.56	-0.8
1,161,123	-	narJ	OKGIIK_05310	0.56	+1.9
1,161,426	+				-0.1
1,161,426	+				-0.8
1,161,426	+				-0.5
1,161,427	-				-0.6
1,161,427	-				-0.0
1,161,454	-				+0.5
1,161,459	+				-1.3
1,161,459	+				+0.3
1,161,459	+				-0.1
1,161,459	+				+0.3
1,161,459	+				+0.1
1,161,459	+				-0.3
1,161,460	-				+0.3
1,161,460	-				+0.7
1,161,460	-				+0.3
1,161,460	-				-2.3
1,161,460	-				+0.9
1,161,516	+	narI	OKGIIK_05315	0.14	+0.6
1,161,516	+	narI	OKGIIK_05315	0.14	+1.1
1,161,516	+	narI	OKGIIK_05315	0.14	-1.5
1,161,516	+	narI	OKGIIK_05315	0.14	-1.3
1,161,516	+	narI	OKGIIK_05315	0.14	-1.6
1,161,516	+	narI	OKGIIK_05315	0.14	+0.1
1,161,516	+	narI	OKGIIK_05315	0.14	+0.2
1,161,516	+	narI	OKGIIK_05315	0.14	-1.8
1,161,516	+	narI	OKGIIK_05315	0.14	-0.0
1,161,516	+	narI	OKGIIK_05315	0.14	-0.3
1,161,516	+	narI	OKGIIK_05315	0.14	+0.5
1,161,516	+	narI	OKGIIK_05315	0.14	-1.1
1,161,516	+	narI	OKGIIK_05315	0.14	+1.0
1,161,516	+	narI	OKGIIK_05315	0.14	-1.0
1,161,517	-	narI	OKGIIK_05315	0.14	-0.9
1,161,517	-	narI	OKGIIK_05315	0.14	-1.6
1,161,517	-	narI	OKGIIK_05315	0.14	+1.2
1,161,517	-	narI	OKGIIK_05315	0.14	-0.8
1,161,517	-	narI	OKGIIK_05315	0.14	+1.0
1,161,517	-	narI	OKGIIK_05315	0.14	-0.5
1,161,517	-	narI	OKGIIK_05315	0.14	-1.9
1,161,517	-	narI	OKGIIK_05315	0.14	-0.7
1,161,517	-	narI	OKGIIK_05315	0.14	+1.7
1,161,517	-	narI	OKGIIK_05315	0.14	+1.9
1,161,517	-	narI	OKGIIK_05315	0.14	-0.0
1,161,517	-	narI	OKGIIK_05315	0.14	-1.6
1,161,517	-	narI	OKGIIK_05315	0.14	+0.6
1,161,517	-	narI	OKGIIK_05315	0.14	+0.9
1,161,587	+	narI	OKGIIK_05315	0.24	-1.6
1,161,649	-	narI	OKGIIK_05315	0.32	-0.0
1,161,835	+	narI	OKGIIK_05315	0.59	-1.8
1,161,835	+	narI	OKGIIK_05315	0.59	-0.9
1,161,835	+	narI	OKGIIK_05315	0.59	+0.6
1,161,835	+	narI	OKGIIK_05315	0.59	+0.1
1,161,835	+	narI	OKGIIK_05315	0.59	+0.9
1,161,836	-	narI	OKGIIK_05315	0.59	-0.3
1,161,836	-	narI	OKGIIK_05315	0.59	-0.1
1,161,836	-	narI	OKGIIK_05315	0.59	+0.7
1,161,836	-	narI	OKGIIK_05315	0.59	+0.3
1,161,843	+	narI	OKGIIK_05315	0.60	+1.3
1,161,843	+	narI	OKGIIK_05315	0.60	+1.0
1,161,843	+	narI	OKGIIK_05315	0.60	-1.5
1,161,843	+	narI	OKGIIK_05315	0.60	+0.2
1,161,843	+	narI	OKGIIK_05315	0.60	-1.7
1,161,844	-	narI	OKGIIK_05315	0.60	-0.9
1,161,844	-	narI	OKGIIK_05315	0.60	-0.1
1,161,844	-	narI	OKGIIK_05315	0.60	+1.3
1,161,844	-	narI	OKGIIK_05315	0.60	-0.6
1,161,946	-	narI	OKGIIK_05315	0.75	+0.5
1,161,946	-	narI	OKGIIK_05315	0.75	-0.3
1,161,969	+	narI	OKGIIK_05315	0.78	-0.0
1,162,036	+	narI	OKGIIK_05315	0.87	+1.1
1,162,036	+	narI	OKGIIK_05315	0.87	+0.7
1,162,036	+	narI	OKGIIK_05315	0.87	+0.7
1,162,036	+	narI	OKGIIK_05315	0.87	+1.9
1,162,036	+	narI	OKGIIK_05315	0.87	+1.9
1,162,036	+	narI	OKGIIK_05315	0.87	+0.3
1,162,037	-	narI	OKGIIK_05315	0.88	-1.5
1,162,037	-	narI	OKGIIK_05315	0.88	-0.7
1,162,037	-	narI	OKGIIK_05315	0.88	-0.0
1,162,037	-	narI	OKGIIK_05315	0.88	-0.5
1,162,037	-	narI	OKGIIK_05315	0.88	-1.3
1,162,037	-	narI	OKGIIK_05315	0.88	-0.1
1,162,037	-	narI	OKGIIK_05315	0.88	-0.5
1,162,037	-	narI	OKGIIK_05315	0.88	-0.4
1,162,056	+				-0.1
1,162,056	+				+2.3
1,162,057	-				-1.0
1,162,057	-				-0.9
1,162,057	-				+1.1
1,162,071	+				+2.1
1,162,072	-				+0.7
1,162,082	-				-1.0
1,162,149	+				-1.3
1,162,150	-				-0.3
1,162,150	-				+0.6
1,162,268	+		OKGIIK_05320	0.15	-0.0
1,162,268	+		OKGIIK_05320	0.15	-0.3
1,162,269	-		OKGIIK_05320	0.16	+2.3
1,162,269	-		OKGIIK_05320	0.16	+0.4
1,162,269	-		OKGIIK_05320	0.16	+0.1
1,162,269	-		OKGIIK_05320	0.16	-0.5