Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05140

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,111,667	+	mdlB	OKGIIK_05135	0.60	-1.1
1,111,667	+	mdlB	OKGIIK_05135	0.60	-0.8
1,111,790	+	mdlB	OKGIIK_05135	0.67	+0.7
1,111,928	+	mdlB	OKGIIK_05135	0.74	-1.3
1,111,929	-	mdlB	OKGIIK_05135	0.74	-0.8
1,111,929	-	mdlB	OKGIIK_05135	0.74	+0.2
1,112,340	-				+0.0
1,112,389	+				-0.8
1,112,389	+				-0.5
1,112,390	-				-0.7
1,112,390	-				+0.7
1,112,390	-				-1.3
1,112,390	-				-0.1
1,112,390	-				-1.5
1,112,399	+				+0.2
1,112,400	-				-0.4
1,112,514	+				-0.6
1,112,515	-				+0.7
1,112,583	+		OKGIIK_05140	0.26	+1.2
1,112,583	+		OKGIIK_05140	0.26	+1.7
1,112,583	+		OKGIIK_05140	0.26	-0.3
1,112,583	+		OKGIIK_05140	0.26	+0.0
1,112,619	+		OKGIIK_05140	0.36	+1.0
1,112,619	+		OKGIIK_05140	0.36	-0.5
1,112,619	+		OKGIIK_05140	0.36	+0.5
1,112,619	+		OKGIIK_05140	0.36	-0.9
1,112,620	-		OKGIIK_05140	0.36	+0.3
1,112,620	-		OKGIIK_05140	0.36	+1.0
1,112,706	+		OKGIIK_05140	0.59	+0.3
1,112,706	+		OKGIIK_05140	0.59	-1.5
1,112,707	-		OKGIIK_05140	0.59	+1.1
1,112,707	-		OKGIIK_05140	0.59	+0.0
1,112,767	-		OKGIIK_05140	0.75	+0.3
1,112,877	+				-0.8
1,112,877	+				-1.4
1,112,877	+				-0.8
1,112,877	+				+0.9
1,112,877	+				+0.6
1,112,878	-				-1.1
1,112,878	-				+0.7
1,112,878	-				+0.3
1,112,995	+				-0.6
1,112,995	+				+1.3
1,112,996	-				-0.4
1,112,996	-				-1.4
1,113,033	+				-0.5
1,113,033	+				+0.5
1,113,033	+				-0.6
1,113,033	+				+0.3
1,113,034	-				+1.2
1,113,034	-				-1.1
1,113,034	-				-0.3
1,113,076	+				-0.4
1,113,076	+				+0.3
1,113,076	+				-0.5
1,113,077	-				-0.7
1,113,077	-				+0.5
1,113,077	-				+0.6
1,113,161	-		OKGIIK_05145	0.11	-1.4
1,113,400	+		OKGIIK_05145	0.26	+0.2
1,113,401	-		OKGIIK_05145	0.26	+1.3
1,113,401	-		OKGIIK_05145	0.26	+1.0
1,113,401	-		OKGIIK_05145	0.26	+2.6
1,113,445	+		OKGIIK_05145	0.28	+0.0
1,113,445	+		OKGIIK_05145	0.28	-1.6
1,113,446	-		OKGIIK_05145	0.29	+2.3
1,113,558	+		OKGIIK_05145	0.36	+1.3
1,113,559	-		OKGIIK_05145	0.36	-1.1
1,113,767	-		OKGIIK_05145	0.49	-0.8
1,113,767	-		OKGIIK_05145	0.49	-1.0
1,113,829	+		OKGIIK_05145	0.53	+1.9
1,113,829	+		OKGIIK_05145	0.53	-0.6
1,113,829	+		OKGIIK_05145	0.53	+0.5
1,113,830	-		OKGIIK_05145	0.53	+1.8
1,113,830	-		OKGIIK_05145	0.53	-1.3