Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05020

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,086,823	+		OKGIIK_05015	0.45	+0.5
1,086,823	+		OKGIIK_05015	0.45	+0.8
1,086,823	+		OKGIIK_05015	0.45	+0.0
1,086,823	+		OKGIIK_05015	0.45	-1.1
1,086,823	+		OKGIIK_05015	0.45	-0.4
1,086,824	-		OKGIIK_05015	0.45	+0.0
1,086,824	-		OKGIIK_05015	0.45	-0.2
1,086,824	-		OKGIIK_05015	0.45	+0.8
1,086,824	-		OKGIIK_05015	0.45	-1.1
1,086,824	-		OKGIIK_05015	0.45	+0.1
1,086,838	+		OKGIIK_05015	0.46	+0.9
1,086,838	+		OKGIIK_05015	0.46	-0.7
1,086,838	+		OKGIIK_05015	0.46	-1.1
1,086,838	+		OKGIIK_05015	0.46	+0.1
1,086,838	+		OKGIIK_05015	0.46	-0.8
1,086,839	-		OKGIIK_05015	0.46	+0.8
1,086,839	-		OKGIIK_05015	0.46	+1.7
1,086,839	-		OKGIIK_05015	0.46	-0.3
1,086,839	-		OKGIIK_05015	0.46	-1.1
1,086,839	-		OKGIIK_05015	0.46	-1.5
1,086,839	-		OKGIIK_05015	0.46	-0.2
1,086,943	+		OKGIIK_05015	0.53	-1.0
1,086,943	+		OKGIIK_05015	0.53	+1.0
1,086,943	+		OKGIIK_05015	0.53	-1.1
1,086,943	+		OKGIIK_05015	0.53	+0.3
1,086,943	+		OKGIIK_05015	0.53	+0.4
1,086,943	+		OKGIIK_05015	0.53	-0.8
1,086,944	-		OKGIIK_05015	0.53	+0.3
1,086,944	-		OKGIIK_05015	0.53	-0.7
1,086,944	-		OKGIIK_05015	0.53	+0.8
1,086,944	-		OKGIIK_05015	0.53	+0.8
1,087,264	+		OKGIIK_05015	0.74	-0.0
1,087,264	+		OKGIIK_05015	0.74	-0.2
1,087,265	-		OKGIIK_05015	0.74	+1.1
1,087,265	-		OKGIIK_05015	0.74	+1.1
1,087,265	-		OKGIIK_05015	0.74	-0.1
1,087,265	-		OKGIIK_05015	0.74	+1.9
1,087,306	+		OKGIIK_05015	0.77	-1.4
1,087,306	+		OKGIIK_05015	0.77	+1.0
1,087,306	+		OKGIIK_05015	0.77	-2.0
1,087,306	+		OKGIIK_05015	0.77	+0.3
1,087,306	+		OKGIIK_05015	0.77	+0.5
1,087,306	+		OKGIIK_05015	0.77	+1.1
1,087,307	-		OKGIIK_05015	0.77	+1.2
1,087,307	-		OKGIIK_05015	0.77	+0.8
1,087,307	-		OKGIIK_05015	0.77	+0.5
1,087,307	-		OKGIIK_05015	0.77	+1.3
1,087,307	-		OKGIIK_05015	0.77	-1.2
1,087,307	-		OKGIIK_05015	0.77	-0.2
1,087,307	-		OKGIIK_05015	0.77	+1.6
1,087,307	-		OKGIIK_05015	0.77	-0.1
1,087,363	+		OKGIIK_05015	0.81	+0.8
1,087,363	+		OKGIIK_05015	0.81	-1.1
1,087,363	+		OKGIIK_05015	0.81	+0.5
1,087,363	+		OKGIIK_05015	0.81	-1.7
1,087,363	+		OKGIIK_05015	0.81	-1.1
1,087,363	+		OKGIIK_05015	0.81	+0.3
1,087,363	+		OKGIIK_05015	0.81	+0.8
1,087,363	+		OKGIIK_05015	0.81	-0.5
1,087,364	-		OKGIIK_05015	0.81	+0.5
1,087,364	-		OKGIIK_05015	0.81	-1.0
1,087,364	-		OKGIIK_05015	0.81	+0.6
1,087,364	-		OKGIIK_05015	0.81	+0.6
1,087,367	+		OKGIIK_05015	0.81	-0.7
1,087,367	+		OKGIIK_05015	0.81	+0.5
1,087,367	+		OKGIIK_05015	0.81	+0.1
1,087,367	+		OKGIIK_05015	0.81	+0.3
1,087,367	+		OKGIIK_05015	0.81	-0.2
1,087,367	+		OKGIIK_05015	0.81	-0.4
1,087,367	+		OKGIIK_05015	0.81	-0.4
1,087,367	+		OKGIIK_05015	0.81	+1.0
1,087,367	+		OKGIIK_05015	0.81	+0.0
1,087,367	+		OKGIIK_05015	0.81	+0.9
1,087,368	-		OKGIIK_05015	0.81	-0.7
1,087,368	-		OKGIIK_05015	0.81	+2.3
1,087,368	-		OKGIIK_05015	0.81	-1.8
1,087,368	-		OKGIIK_05015	0.81	-0.6
1,087,368	-		OKGIIK_05015	0.81	+0.0
1,087,368	-		OKGIIK_05015	0.81	-0.3
1,087,368	-		OKGIIK_05015	0.81	+0.0
1,087,369	+		OKGIIK_05015	0.81	+0.3
1,087,369	+		OKGIIK_05015	0.81	-0.1
1,087,369	+		OKGIIK_05015	0.81	+1.1
1,087,369	+		OKGIIK_05015	0.81	-2.0
1,087,369	+		OKGIIK_05015	0.81	+1.0
1,087,369	+		OKGIIK_05015	0.81	-0.7
1,087,369	+		OKGIIK_05015	0.81	-0.8
1,087,369	+		OKGIIK_05015	0.81	-0.2
1,087,369	+		OKGIIK_05015	0.81	+0.0
1,087,369	+		OKGIIK_05015	0.81	+0.4
1,087,369	+		OKGIIK_05015	0.81	-1.5
1,087,369	+		OKGIIK_05015	0.81	+0.0
1,087,369	+		OKGIIK_05015	0.81	-0.5
1,087,369	+		OKGIIK_05015	0.81	-0.7
1,087,369	+		OKGIIK_05015	0.81	+0.3
1,087,369	+		OKGIIK_05015	0.81	+0.2
1,087,369	+		OKGIIK_05015	0.81	+1.7
1,087,369	+		OKGIIK_05015	0.81	-0.8
1,087,369	+		OKGIIK_05015	0.81	-0.4
1,087,370	-		OKGIIK_05015	0.82	+0.2
1,087,370	-		OKGIIK_05015	0.82	+0.8
1,087,370	-		OKGIIK_05015	0.82	+1.0
1,087,370	-		OKGIIK_05015	0.82	+0.8
1,087,370	-		OKGIIK_05015	0.82	+0.2
1,087,370	-		OKGIIK_05015	0.82	-1.0
1,087,370	-		OKGIIK_05015	0.82	+0.4
1,087,370	-		OKGIIK_05015	0.82	-0.8
1,087,370	-		OKGIIK_05015	0.82	+0.8
1,087,370	-		OKGIIK_05015	0.82	+0.4
1,087,370	-		OKGIIK_05015	0.82	-1.0
1,087,370	-		OKGIIK_05015	0.82	+0.3
1,087,370	-		OKGIIK_05015	0.82	+0.3
1,087,370	-		OKGIIK_05015	0.82	+0.5
1,087,370	-		OKGIIK_05015	0.82	+0.6
1,087,370	-		OKGIIK_05015	0.82	+0.6
1,087,370	-		OKGIIK_05015	0.82	+0.8
1,087,370	-		OKGIIK_05015	0.82	+0.1
1,087,370	-		OKGIIK_05015	0.82	+0.3
1,087,370	-		OKGIIK_05015	0.82	-0.2
1,087,375	+		OKGIIK_05015	0.82	+1.6
1,087,375	+		OKGIIK_05015	0.82	+1.3
1,087,375	+		OKGIIK_05015	0.82	+1.0
1,087,375	+		OKGIIK_05015	0.82	+0.8
1,087,376	-		OKGIIK_05015	0.82	-1.5
1,087,376	-		OKGIIK_05015	0.82	-1.8
1,087,376	-		OKGIIK_05015	0.82	+1.1
1,087,376	-		OKGIIK_05015	0.82	-1.0
1,087,376	-		OKGIIK_05015	0.82	+1.2
1,087,376	-		OKGIIK_05015	0.82	+0.8
1,087,376	-		OKGIIK_05015	0.82	+1.3
1,087,417	+		OKGIIK_05015	0.85	-0.5
1,087,730	-				+0.0
1,087,749	+				-2.0
1,087,750	-				-0.2
1,087,767	+				-0.1
1,087,768	-				-0.7
1,087,768	-				+0.9
1,087,768	-				+0.0
1,087,848	+				+2.3
1,087,848	+				+1.1
1,087,848	+				-0.8
1,087,849	-				+0.8
1,087,849	-				+0.5
1,088,193	+		OKGIIK_05020	0.70	+0.1
1,088,193	+		OKGIIK_05020	0.70	-0.5
1,088,193	+		OKGIIK_05020	0.70	+2.5
1,088,194	-		OKGIIK_05020	0.70	+0.3
1,088,194	-		OKGIIK_05020	0.70	-0.2
1,088,356	-				+0.2
1,088,450	+				-0.3
1,088,450	+				+0.3
1,088,450	+				+0.3
1,088,450	+				-0.5
1,088,450	+				-1.0
1,088,450	+				+0.3
1,088,456	+				-1.0
1,088,456	+				-0.7
1,088,456	+				-1.2
1,088,456	+				+0.0
1,088,456	+				-3.4
1,088,456	+				-1.0
1,088,457	-				+0.3
1,088,493	+				-0.2
1,088,519	+		OKGIIK_05025	0.13	-0.9
1,088,520	-		OKGIIK_05025	0.14	+0.3
1,088,573	+		OKGIIK_05025	0.24	-1.2
1,088,573	+		OKGIIK_05025	0.24	+0.3
1,088,573	+		OKGIIK_05025	0.24	-1.5
1,088,573	+		OKGIIK_05025	0.24	-0.8
1,088,573	+		OKGIIK_05025	0.24	-0.2
1,088,573	+		OKGIIK_05025	0.24	+0.0
1,088,573	+		OKGIIK_05025	0.24	-0.7
1,088,574	-		OKGIIK_05025	0.24	-0.7
1,088,574	-		OKGIIK_05025	0.24	+1.3
1,088,574	-		OKGIIK_05025	0.24	-1.2
1,088,574	-		OKGIIK_05025	0.24	+0.3
1,088,574	-		OKGIIK_05025	0.24	+0.8
1,088,574	-		OKGIIK_05025	0.24	+1.1
1,088,574	-		OKGIIK_05025	0.24	-0.1
1,088,574	-		OKGIIK_05025	0.24	+0.8
1,088,574	-		OKGIIK_05025	0.24	+0.5
1,088,574	-		OKGIIK_05025	0.24	-1.4
1,088,574	-		OKGIIK_05025	0.24	+0.0
1,088,574	-		OKGIIK_05025	0.24	-1.0
1,088,574	-		OKGIIK_05025	0.24	-1.5
1,088,574	-		OKGIIK_05025	0.24	-1.0
1,088,574	-		OKGIIK_05025	0.24	-0.7
1,088,574	-		OKGIIK_05025	0.24	+0.8
1,088,574	-		OKGIIK_05025	0.24	-0.4
1,088,582	+		OKGIIK_05025	0.25	-0.2
1,088,582	+		OKGIIK_05025	0.25	+0.2
1,088,582	+		OKGIIK_05025	0.25	+0.3
1,088,582	+		OKGIIK_05025	0.25	-1.5
1,088,583	-		OKGIIK_05025	0.26	-0.8
1,088,714	+		OKGIIK_05025	0.51	-0.5
1,088,714	+		OKGIIK_05025	0.51	-0.8
1,088,714	+		OKGIIK_05025	0.51	-0.8
1,088,714	+		OKGIIK_05025	0.51	-1.1
1,088,714	+		OKGIIK_05025	0.51	+1.9
1,088,714	+		OKGIIK_05025	0.51	-0.2
1,088,715	-		OKGIIK_05025	0.51	-0.2
1,088,715	-		OKGIIK_05025	0.51	+0.3
1,088,715	-		OKGIIK_05025	0.51	-0.2
1,088,715	-		OKGIIK_05025	0.51	+0.0
1,088,715	-		OKGIIK_05025	0.51	+0.2
1,088,715	-		OKGIIK_05025	0.51	+0.3
1,088,798	+		OKGIIK_05025	0.67	+0.1
1,088,828	+		OKGIIK_05025	0.73	-1.3
1,088,828	+		OKGIIK_05025	0.73	-1.1
1,088,829	-		OKGIIK_05025	0.73	-0.2
1,089,004	-				+0.5
1,089,004	-				+0.9
1,089,004	-				-0.5
1,089,004	-				+0.0
1,089,071	+				-1.0
1,089,082	+				-0.1
1,089,082	+				-1.4
1,089,082	+				+0.3
1,089,082	+				+1.1
1,089,082	+				+0.3
1,089,082	+				+0.3
1,089,083	-				-1.1
1,089,083	-				+0.2
1,089,299	+		OKGIIK_05030	0.39	-0.4
1,089,299	+		OKGIIK_05030	0.39	-0.8
1,089,299	+		OKGIIK_05030	0.39	-0.7
1,089,299	+		OKGIIK_05030	0.39	-0.8
1,089,299	+		OKGIIK_05030	0.39	+0.9
1,089,299	+		OKGIIK_05030	0.39	+0.6
1,089,300	-		OKGIIK_05030	0.39	-0.5
1,089,300	-		OKGIIK_05030	0.39	+0.0
1,089,300	-		OKGIIK_05030	0.39	-0.1
1,089,300	-		OKGIIK_05030	0.39	+1.5
1,089,300	-		OKGIIK_05030	0.39	+0.3
1,089,300	-		OKGIIK_05030	0.39	+1.2
1,089,300	-		OKGIIK_05030	0.39	-0.5
1,089,300	-		OKGIIK_05030	0.39	-1.0