Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_04890

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,061,367	+		OKGIIK_04885	0.26	+0.3
1,061,367	+		OKGIIK_04885	0.26	-0.3
1,061,367	+		OKGIIK_04885	0.26	-1.8
1,061,415	+		OKGIIK_04885	0.31	-0.5
1,061,572	-		OKGIIK_04885	0.47	+1.0
1,061,572	-		OKGIIK_04885	0.47	+0.3
1,062,211	+				+2.0
1,062,211	+				-0.1
1,062,211	+				+0.3
1,062,212	-				+0.3
1,062,212	-				+0.0
1,062,212	-				-0.9
1,062,212	-				-0.1
1,062,212	-				-0.1
1,062,212	-				+0.2
1,062,212	-				-0.8
1,062,245	-				+0.0
1,062,245	-				+2.3
1,062,711	+		OKGIIK_04890	0.12	+0.3
1,062,711	+		OKGIIK_04890	0.12	+0.3
1,062,711	+		OKGIIK_04890	0.12	+2.6
1,062,711	+		OKGIIK_04890	0.12	+1.8
1,062,711	+		OKGIIK_04890	0.12	+1.7
1,062,711	+		OKGIIK_04890	0.12	+0.8
1,062,711	+		OKGIIK_04890	0.12	-0.4
1,062,711	+		OKGIIK_04890	0.12	+2.1
1,062,712	-		OKGIIK_04890	0.12	+1.0
1,062,712	-		OKGIIK_04890	0.12	+1.3
1,062,712	-		OKGIIK_04890	0.12	+1.0
1,062,712	-		OKGIIK_04890	0.12	+0.2
1,062,712	-		OKGIIK_04890	0.12	-0.5
1,062,712	-		OKGIIK_04890	0.12	-0.2
1,062,795	+		OKGIIK_04890	0.15	+1.1
1,062,795	+		OKGIIK_04890	0.15	+1.2
1,062,795	+		OKGIIK_04890	0.15	-1.0
1,062,796	-		OKGIIK_04890	0.15	+0.5
1,062,796	-		OKGIIK_04890	0.15	-1.1
1,062,796	-		OKGIIK_04890	0.15	+1.1
1,062,796	-		OKGIIK_04890	0.15	+1.9
1,062,796	-		OKGIIK_04890	0.15	+1.3
1,062,796	-		OKGIIK_04890	0.15	+1.3
1,063,017	+		OKGIIK_04890	0.22	+0.0
1,063,017	+		OKGIIK_04890	0.22	-0.5
1,063,017	+		OKGIIK_04890	0.22	-1.8
1,063,017	+		OKGIIK_04890	0.22	-0.3
1,063,017	+		OKGIIK_04890	0.22	+2.5
1,063,017	+		OKGIIK_04890	0.22	-1.8
1,063,018	-		OKGIIK_04890	0.22	+0.3
1,063,018	-		OKGIIK_04890	0.22	+0.9
1,063,018	-		OKGIIK_04890	0.22	+0.6
1,063,018	-		OKGIIK_04890	0.22	+0.1
1,063,018	-		OKGIIK_04890	0.22	+0.7
1,063,018	-		OKGIIK_04890	0.22	+0.5
1,063,018	-		OKGIIK_04890	0.22	-0.3
1,063,018	-		OKGIIK_04890	0.22	-0.1
1,063,018	-		OKGIIK_04890	0.22	+0.0
1,063,018	-		OKGIIK_04890	0.22	-0.8
1,063,023	+		OKGIIK_04890	0.22	+0.5
1,063,023	+		OKGIIK_04890	0.22	+1.3
1,063,023	+		OKGIIK_04890	0.22	+0.6
1,063,023	+		OKGIIK_04890	0.22	+1.0
1,063,023	+		OKGIIK_04890	0.22	+1.6
1,063,023	+		OKGIIK_04890	0.22	+1.2
1,063,023	+		OKGIIK_04890	0.22	-1.1
1,063,023	+		OKGIIK_04890	0.22	-1.4
1,063,023	+		OKGIIK_04890	0.22	-0.6
1,063,023	+		OKGIIK_04890	0.22	-0.5
1,063,023	+		OKGIIK_04890	0.22	+1.0
1,063,023	+		OKGIIK_04890	0.22	-0.8
1,063,023	+		OKGIIK_04890	0.22	+0.3
1,063,023	+		OKGIIK_04890	0.22	-0.3
1,063,023	+		OKGIIK_04890	0.22	+1.1
1,063,024	-		OKGIIK_04890	0.22	+1.3
1,063,024	-		OKGIIK_04890	0.22	+0.2
1,063,024	-		OKGIIK_04890	0.22	+2.5
1,063,024	-		OKGIIK_04890	0.22	-0.5
1,063,024	-		OKGIIK_04890	0.22	+0.2
1,063,024	-		OKGIIK_04890	0.22	-0.1
1,063,024	-		OKGIIK_04890	0.22	+0.2
1,063,024	-		OKGIIK_04890	0.22	-1.0
1,063,024	-		OKGIIK_04890	0.22	-1.8
1,063,024	-		OKGIIK_04890	0.22	+0.1
1,063,024	-		OKGIIK_04890	0.22	+2.3
1,063,024	-		OKGIIK_04890	0.22	-1.2
1,063,024	-		OKGIIK_04890	0.22	-0.3
1,063,024	-		OKGIIK_04890	0.22	-1.6
1,063,024	-		OKGIIK_04890	0.22	-0.3
1,063,024	-		OKGIIK_04890	0.22	+0.0
1,063,074	+		OKGIIK_04890	0.24	+1.5
1,063,074	+		OKGIIK_04890	0.24	-0.3
1,063,074	+		OKGIIK_04890	0.24	+0.9
1,063,074	+		OKGIIK_04890	0.24	-0.4
1,063,075	-		OKGIIK_04890	0.24	-1.0
1,063,075	-		OKGIIK_04890	0.24	-0.6
1,063,075	-		OKGIIK_04890	0.24	+2.0
1,063,075	-		OKGIIK_04890	0.24	+0.0
1,063,143	+		OKGIIK_04890	0.26	+0.5
1,063,143	+		OKGIIK_04890	0.26	+1.3
1,063,143	+		OKGIIK_04890	0.26	+1.6
1,063,144	-		OKGIIK_04890	0.26	+0.5
1,063,144	-		OKGIIK_04890	0.26	-0.8
1,063,340	+		OKGIIK_04890	0.32	-0.3
1,063,340	+		OKGIIK_04890	0.32	-0.7
1,063,341	-		OKGIIK_04890	0.32	+0.0
1,063,341	-		OKGIIK_04890	0.32	-0.7
1,063,476	+		OKGIIK_04890	0.36	-0.1
1,063,476	+		OKGIIK_04890	0.36	+1.2
1,063,476	+		OKGIIK_04890	0.36	+2.6
1,063,476	+		OKGIIK_04890	0.36	+1.7
1,063,476	+		OKGIIK_04890	0.36	+0.1
1,063,476	+		OKGIIK_04890	0.36	+1.3
1,063,476	+		OKGIIK_04890	0.36	+2.1
1,063,476	+		OKGIIK_04890	0.36	-1.1
1,063,476	+		OKGIIK_04890	0.36	+0.1
1,063,476	+		OKGIIK_04890	0.36	-1.4
1,063,476	+		OKGIIK_04890	0.36	+0.3
1,063,476	+		OKGIIK_04890	0.36	-1.0
1,063,476	+		OKGIIK_04890	0.36	-0.8
1,063,476	+		OKGIIK_04890	0.36	+1.0
1,063,477	-		OKGIIK_04890	0.36	+0.9
1,063,477	-		OKGIIK_04890	0.36	-1.1
1,063,477	-		OKGIIK_04890	0.36	-0.5
1,063,477	-		OKGIIK_04890	0.36	+1.3
1,063,477	-		OKGIIK_04890	0.36	-1.0
1,063,477	-		OKGIIK_04890	0.36	-1.1
1,063,477	-		OKGIIK_04890	0.36	-0.2
1,063,477	-		OKGIIK_04890	0.36	-0.5
1,063,477	-		OKGIIK_04890	0.36	-0.2
1,063,477	-		OKGIIK_04890	0.36	-1.0
1,063,477	-		OKGIIK_04890	0.36	-0.6
1,063,477	-		OKGIIK_04890	0.36	-0.1
1,063,477	-		OKGIIK_04890	0.36	+1.3
1,063,477	-		OKGIIK_04890	0.36	-0.5
1,063,477	-		OKGIIK_04890	0.36	+1.0
1,063,477	-		OKGIIK_04890	0.36	+0.0
1,063,611	+		OKGIIK_04890	0.40	-0.3
1,063,611	+		OKGIIK_04890	0.40	+1.1
1,063,611	+		OKGIIK_04890	0.40	-0.5
1,063,611	+		OKGIIK_04890	0.40	-0.1
1,063,612	-		OKGIIK_04890	0.40	+1.2
1,063,612	-		OKGIIK_04890	0.40	+0.9
1,063,612	-		OKGIIK_04890	0.40	+0.0
1,063,612	-		OKGIIK_04890	0.40	+1.3
1,063,612	-		OKGIIK_04890	0.40	-0.8
1,063,612	-		OKGIIK_04890	0.40	+0.0
1,063,612	-		OKGIIK_04890	0.40	-0.2
1,063,612	-		OKGIIK_04890	0.40	-1.0
1,063,902	+		OKGIIK_04890	0.50	-2.0
1,063,903	-		OKGIIK_04890	0.50	+0.5
1,063,903	-		OKGIIK_04890	0.50	-0.8
1,063,903	-		OKGIIK_04890	0.50	-2.1
1,064,022	+		OKGIIK_04890	0.53	+1.7
1,064,022	+		OKGIIK_04890	0.53	-1.3
1,064,023	-		OKGIIK_04890	0.53	+0.3
1,064,028	+		OKGIIK_04890	0.54	+0.0
1,064,028	+		OKGIIK_04890	0.54	+0.5
1,064,028	+		OKGIIK_04890	0.54	+1.0
1,064,028	+		OKGIIK_04890	0.54	-0.5
1,064,028	+		OKGIIK_04890	0.54	+0.7
1,064,028	+		OKGIIK_04890	0.54	-0.5
1,064,028	+		OKGIIK_04890	0.54	+0.8
1,064,028	+		OKGIIK_04890	0.54	+0.8
1,064,028	+		OKGIIK_04890	0.54	+0.6
1,064,028	+		OKGIIK_04890	0.54	-0.3
1,064,028	+		OKGIIK_04890	0.54	-0.3
1,064,029	-		OKGIIK_04890	0.54	+1.1
1,064,029	-		OKGIIK_04890	0.54	+0.7
1,064,029	-		OKGIIK_04890	0.54	+0.3
1,064,029	-		OKGIIK_04890	0.54	-0.4
1,064,029	-		OKGIIK_04890	0.54	-2.7
1,064,029	-		OKGIIK_04890	0.54	+0.9
1,064,029	-		OKGIIK_04890	0.54	-0.5
1,064,029	-		OKGIIK_04890	0.54	+0.9
1,064,029	-		OKGIIK_04890	0.54	-1.8
1,064,029	-		OKGIIK_04890	0.54	-0.8
1,064,029	-		OKGIIK_04890	0.54	+0.1
1,064,029	-		OKGIIK_04890	0.54	+1.0
1,064,100	-		OKGIIK_04890	0.56	+1.3
1,064,205	+		OKGIIK_04890	0.59	+1.6
1,064,205	+		OKGIIK_04890	0.59	+0.7
1,064,205	+		OKGIIK_04890	0.59	+0.0
1,064,205	+		OKGIIK_04890	0.59	+0.0
1,064,205	+		OKGIIK_04890	0.59	+1.1
1,064,205	+		OKGIIK_04890	0.59	+0.3
1,064,205	+		OKGIIK_04890	0.59	-0.8
1,064,205	+		OKGIIK_04890	0.59	+0.5
1,064,205	+		OKGIIK_04890	0.59	+3.1
1,064,206	-		OKGIIK_04890	0.59	+0.2
1,064,206	-		OKGIIK_04890	0.59	-1.0
1,064,206	-		OKGIIK_04890	0.59	+0.9
1,064,206	-		OKGIIK_04890	0.59	+2.3
1,064,206	-		OKGIIK_04890	0.59	+2.0
1,064,206	-		OKGIIK_04890	0.59	-0.7
1,064,206	-		OKGIIK_04890	0.59	-2.7
1,064,206	-		OKGIIK_04890	0.59	+0.3
1,064,206	-		OKGIIK_04890	0.59	+0.0
1,064,408	+		OKGIIK_04890	0.65	-0.1
1,064,408	+		OKGIIK_04890	0.65	+1.3
1,064,409	-		OKGIIK_04890	0.65	-0.7
1,064,409	-		OKGIIK_04890	0.65	-0.7
1,064,544	+		OKGIIK_04890	0.70	+0.3
1,064,544	+		OKGIIK_04890	0.70	-0.1
1,064,544	+		OKGIIK_04890	0.70	-0.8
1,064,545	-		OKGIIK_04890	0.70	+0.9
1,064,545	-		OKGIIK_04890	0.70	-1.1
1,064,545	-		OKGIIK_04890	0.70	+0.5
1,064,545	-		OKGIIK_04890	0.70	-0.1
1,064,545	-		OKGIIK_04890	0.70	+0.7
1,064,545	-		OKGIIK_04890	0.70	-1.0
1,064,926	-		OKGIIK_04890	0.82	-0.8
1,064,961	+		OKGIIK_04890	0.83	-0.8
1,064,961	+		OKGIIK_04890	0.83	+0.5
1,064,961	+		OKGIIK_04890	0.83	+0.5
1,064,962	-		OKGIIK_04890	0.83	+0.2
1,064,962	-		OKGIIK_04890	0.83	+2.5
1,064,962	-		OKGIIK_04890	0.83	+1.3
1,065,099	+		OKGIIK_04890	0.87	-0.8
1,065,099	+		OKGIIK_04890	0.87	-0.3
1,065,099	+		OKGIIK_04890	0.87	+0.2
1,065,099	+		OKGIIK_04890	0.87	+1.3
1,065,099	+		OKGIIK_04890	0.87	-0.1
1,065,099	+		OKGIIK_04890	0.87	-0.4
1,065,099	+		OKGIIK_04890	0.87	-0.8
1,065,099	+		OKGIIK_04890	0.87	-0.3
1,065,100	-		OKGIIK_04890	0.87	+0.6
1,065,100	-		OKGIIK_04890	0.87	+0.4
1,065,100	-		OKGIIK_04890	0.87	+0.9
1,065,100	-		OKGIIK_04890	0.87	+0.0
1,065,100	-		OKGIIK_04890	0.87	+2.0
1,065,100	-		OKGIIK_04890	0.87	-0.1
1,065,100	-		OKGIIK_04890	0.87	-0.7
1,065,100	-		OKGIIK_04890	0.87	-0.5
1,065,100	-		OKGIIK_04890	0.87	+2.3
1,065,100	-		OKGIIK_04890	0.87	-0.7
1,065,100	-		OKGIIK_04890	0.87	-0.5
1,065,100	-		OKGIIK_04890	0.87	+0.6
1,065,100	-		OKGIIK_04890	0.87	-0.3
1,065,100	-		OKGIIK_04890	0.87	-1.0
1,065,192	+				+0.7
1,065,192	+				+0.5
1,065,192	+				+1.0
1,065,192	+				-0.3
1,065,193	-				+2.3
1,065,193	-				-0.5
1,065,193	-				+0.3
1,065,193	-				+0.5
1,065,193	-				+1.9
1,065,193	-				+1.6
1,065,193	-				-0.3
1,065,193	-				-0.3
1,065,193	-				+1.3
1,065,201	+				+1.0
1,065,201	+				-0.3
1,065,201	+				+2.0
1,065,204	+				-0.7
1,065,204	+				+0.9
1,065,205	-				+1.5
1,065,217	-				-0.3
1,065,217	-				+0.3
1,065,217	-				-0.7
1,065,217	-				+0.7
1,065,249	+				-0.8
1,065,249	+				-0.7
1,065,249	+				+2.1
1,065,249	+				-0.7
1,065,249	+				+0.7
1,065,250	-				-0.3
1,065,250	-				+1.1
1,065,250	-				+1.1
1,065,250	-				-1.3
1,065,316	+				+0.0
1,065,316	+				-0.3
1,065,316	+				+0.2
1,065,316	+				-1.5
1,065,316	+				+1.4
1,065,317	-				+0.0
1,065,317	-				-1.7
1,065,317	-				+0.6
1,065,317	-				-0.5
1,065,317	-				+0.2
1,065,317	-				-0.3
1,065,317	-				-0.5
1,065,317	-				+1.6
1,065,317	-				+1.3
1,065,317	-				+0.2
1,065,318	+				+0.8
1,065,318	+				+0.2
1,065,318	+				-1.0
1,065,318	+				-2.2
1,065,318	+				+0.5
1,065,319	-				+0.0
1,065,319	-				+1.0
1,065,319	-				+0.3
1,065,319	-				-0.3
1,065,319	-				+0.3
1,065,319	-				+2.0
1,065,319	-				-0.8
1,065,397	-				-1.1
1,065,397	-				+0.3
1,065,420	+				+1.7
1,065,420	+				-1.6
1,065,421	-				+0.6
1,065,546	-				-1.0
1,065,705	-		OKGIIK_04895	0.14	-0.7
1,065,705	-		OKGIIK_04895	0.14	-0.1
1,065,705	-		OKGIIK_04895	0.14	-1.5
1,065,705	-		OKGIIK_04895	0.14	-0.9
1,065,706	+		OKGIIK_04895	0.14	+0.9
1,065,706	+		OKGIIK_04895	0.14	-0.8
1,065,707	-		OKGIIK_04895	0.14	-0.6
1,066,205	+		OKGIIK_04895	0.56	+0.7
1,066,205	+		OKGIIK_04895	0.56	+0.0
1,066,302	+		OKGIIK_04895	0.64	-1.1
1,066,302	+		OKGIIK_04895	0.64	-0.7
1,066,302	+		OKGIIK_04895	0.64	-1.4
1,066,303	-		OKGIIK_04895	0.65	+0.5
1,066,303	-		OKGIIK_04895	0.65	+3.3
1,066,449	-		OKGIIK_04895	0.77	-1.3
1,066,493	+		OKGIIK_04895	0.81	+1.5
1,066,494	-		OKGIIK_04895	0.81	+0.5
1,066,494	-		OKGIIK_04895	0.81	-0.7