Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_04800

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,043,403	+				-2.1
1,043,403	+				-1.0
1,043,403	+				-0.1
1,043,404	-				-1.7
1,043,404	-				-0.7
1,043,404	-				-0.4
1,043,405	+				-0.8
1,043,405	+				-1.4
1,043,405	+				-1.0
1,043,405	+				-1.2
1,043,405	+				-2.5
1,043,405	+				-0.4
1,043,405	+				-0.5
1,043,405	+				-1.8
1,043,405	+				+0.4
1,043,405	+				+0.6
1,043,405	+				-0.4
1,043,405	+				+0.6
1,043,405	+				+0.6
1,043,405	+				-0.4
1,043,405	+				-0.0
1,043,405	+				-2.9
1,043,405	+				-1.2
1,043,405	+				+0.2
1,043,405	+				-0.2
1,043,405	+				-1.0
1,043,405	+				-2.1
1,043,405	+				-0.7
1,043,405	+				-0.6
1,043,405	+				-1.8
1,043,405	+				-0.2
1,043,405	+				-1.0
1,043,405	+				-0.7
1,043,405	+				-0.4
1,043,405	+				-0.7
1,043,405	+				-0.1
1,043,405	+				-0.2
1,043,405	+				-1.2
1,043,405	+				-1.0
1,043,405	+				-0.2
1,043,405	+				+0.0
1,043,405	+				-0.7
1,043,406	-				-0.7
1,043,406	-				-1.3
1,043,406	-				+0.9
1,043,406	-				-3.0
1,043,406	-				+1.1
1,043,406	-				-1.6
1,043,406	-				-2.0
1,043,406	-				-0.8
1,043,406	-				-2.4
1,043,406	-				+0.5
1,043,406	-				-1.8
1,043,406	-				-1.0
1,043,406	-				-0.8
1,043,406	-				-0.4
1,043,406	-				-1.2
1,043,406	-				-1.4
1,043,406	-				-0.4
1,043,406	-				-0.4
1,043,406	-				-1.4
1,043,599	+	prmB	OKGIIK_04795	0.17	+0.4
1,043,600	-	prmB	OKGIIK_04795	0.18	-0.4
1,043,600	-	prmB	OKGIIK_04795	0.18	-1.1
1,043,664	+	prmB	OKGIIK_04795	0.24	-0.1
1,043,664	+	prmB	OKGIIK_04795	0.24	-1.0
1,043,664	+	prmB	OKGIIK_04795	0.24	-1.6
1,043,686	+	prmB	OKGIIK_04795	0.27	+0.6
1,043,686	+	prmB	OKGIIK_04795	0.27	-0.4
1,043,686	+	prmB	OKGIIK_04795	0.27	-1.4
1,043,686	+	prmB	OKGIIK_04795	0.27	+0.6
1,043,686	+	prmB	OKGIIK_04795	0.27	-1.3
1,043,686	+	prmB	OKGIIK_04795	0.27	+0.1
1,043,686	+	prmB	OKGIIK_04795	0.27	-1.0
1,043,686	+	prmB	OKGIIK_04795	0.27	+0.6
1,043,686	+	prmB	OKGIIK_04795	0.27	-3.0
1,043,687	-	prmB	OKGIIK_04795	0.27	-1.2
1,043,687	-	prmB	OKGIIK_04795	0.27	-2.0
1,043,687	-	prmB	OKGIIK_04795	0.27	-2.3
1,043,687	-	prmB	OKGIIK_04795	0.27	+0.0
1,043,687	-	prmB	OKGIIK_04795	0.27	-0.7
1,043,687	-	prmB	OKGIIK_04795	0.27	-0.7
1,043,687	-	prmB	OKGIIK_04795	0.27	-0.5
1,043,687	-	prmB	OKGIIK_04795	0.27	-0.4
1,043,687	-	prmB	OKGIIK_04795	0.27	-0.7
1,043,872	+	prmB	OKGIIK_04795	0.47	-1.6
1,043,872	+	prmB	OKGIIK_04795	0.47	-0.7
1,043,872	+	prmB	OKGIIK_04795	0.47	-0.4
1,043,872	+	prmB	OKGIIK_04795	0.47	-2.0
1,043,872	+	prmB	OKGIIK_04795	0.47	-2.3
1,043,872	+	prmB	OKGIIK_04795	0.47	+0.8
1,043,872	+	prmB	OKGIIK_04795	0.47	-0.4
1,043,872	+	prmB	OKGIIK_04795	0.47	-0.6
1,043,872	+	prmB	OKGIIK_04795	0.47	-0.4
1,043,873	-	prmB	OKGIIK_04795	0.47	-2.2
1,043,873	-	prmB	OKGIIK_04795	0.47	-0.7
1,043,873	-	prmB	OKGIIK_04795	0.47	-0.3
1,043,873	-	prmB	OKGIIK_04795	0.47	+0.3
1,043,873	-	prmB	OKGIIK_04795	0.47	-1.0
1,043,873	-	prmB	OKGIIK_04795	0.47	-1.0
1,043,873	-	prmB	OKGIIK_04795	0.47	-1.2
1,043,873	-	prmB	OKGIIK_04795	0.47	-1.6
1,043,873	-	prmB	OKGIIK_04795	0.47	-1.4
1,043,873	-	prmB	OKGIIK_04795	0.47	-0.7
1,043,873	-	prmB	OKGIIK_04795	0.47	-0.4
1,044,016	+	prmB	OKGIIK_04795	0.62	-1.2
1,044,016	+	prmB	OKGIIK_04795	0.62	+0.2
1,044,016	+	prmB	OKGIIK_04795	0.62	-0.4
1,044,016	+	prmB	OKGIIK_04795	0.62	+1.0
1,044,016	+	prmB	OKGIIK_04795	0.62	-1.5
1,044,016	+	prmB	OKGIIK_04795	0.62	+0.0
1,044,016	+	prmB	OKGIIK_04795	0.62	-0.4
1,044,016	+	prmB	OKGIIK_04795	0.62	-1.2
1,044,016	+	prmB	OKGIIK_04795	0.62	-1.0
1,044,016	+	prmB	OKGIIK_04795	0.62	-0.3
1,044,016	+	prmB	OKGIIK_04795	0.62	-0.4
1,044,016	+	prmB	OKGIIK_04795	0.62	-0.7
1,044,016	+	prmB	OKGIIK_04795	0.62	-0.7
1,044,016	+	prmB	OKGIIK_04795	0.62	-0.7
1,044,017	-	prmB	OKGIIK_04795	0.63	-0.4
1,044,017	-	prmB	OKGIIK_04795	0.63	-2.2
1,044,017	-	prmB	OKGIIK_04795	0.63	-1.2
1,044,017	-	prmB	OKGIIK_04795	0.63	-1.2
1,044,017	-	prmB	OKGIIK_04795	0.63	-2.1
1,044,017	-	prmB	OKGIIK_04795	0.63	-1.4
1,044,017	-	prmB	OKGIIK_04795	0.63	-2.3
1,044,017	-	prmB	OKGIIK_04795	0.63	-0.4
1,044,017	-	prmB	OKGIIK_04795	0.63	+1.6
1,044,017	-	prmB	OKGIIK_04795	0.63	-1.0
1,044,017	-	prmB	OKGIIK_04795	0.63	-0.2
1,044,017	-	prmB	OKGIIK_04795	0.63	-1.2
1,044,017	-	prmB	OKGIIK_04795	0.63	+0.3
1,044,017	-	prmB	OKGIIK_04795	0.63	-1.0
1,044,017	-	prmB	OKGIIK_04795	0.63	-0.4
1,044,043	+	prmB	OKGIIK_04795	0.65	-0.4
1,044,043	+	prmB	OKGIIK_04795	0.65	-0.2
1,044,043	+	prmB	OKGIIK_04795	0.65	-0.4
1,044,043	+	prmB	OKGIIK_04795	0.65	-0.6
1,044,043	+	prmB	OKGIIK_04795	0.65	-0.9
1,044,043	+	prmB	OKGIIK_04795	0.65	-2.4
1,044,044	-	prmB	OKGIIK_04795	0.65	-0.7
1,044,061	+	prmB	OKGIIK_04795	0.67	-0.7
1,044,061	+	prmB	OKGIIK_04795	0.67	-0.1
1,044,062	-	prmB	OKGIIK_04795	0.67	-0.7
1,044,082	+	prmB	OKGIIK_04795	0.70	-1.4
1,044,082	+	prmB	OKGIIK_04795	0.70	-1.4
1,044,463	+	rimL	OKGIIK_04800	0.18	-1.7
1,044,464	-	rimL	OKGIIK_04800	0.18	-1.4
1,044,464	-	rimL	OKGIIK_04800	0.18	-1.7
1,044,486	+	rimL	OKGIIK_04800	0.22	+0.6
1,044,486	+	rimL	OKGIIK_04800	0.22	-1.4
1,044,486	+	rimL	OKGIIK_04800	0.22	-1.6
1,044,486	+	rimL	OKGIIK_04800	0.22	-1.4
1,044,902	-				-1.7
1,044,902	-				-0.5
1,045,002	+				-0.7
1,045,002	+				-0.4
1,045,002	+				+0.6
1,045,002	+				+0.6
1,045,002	+				+0.6
1,045,002	+				-1.2
1,045,016	+				-0.7
1,045,017	-				-1.6
1,045,357	-	aroC	OKGIIK_04805	0.30	-1.2
1,045,362	+	aroC	OKGIIK_04805	0.30	-1.0
1,045,362	+	aroC	OKGIIK_04805	0.30	-0.4
1,045,362	+	aroC	OKGIIK_04805	0.30	-1.1
1,045,362	+	aroC	OKGIIK_04805	0.30	-0.7
1,045,362	+	aroC	OKGIIK_04805	0.30	-0.4
1,045,363	-	aroC	OKGIIK_04805	0.30	-0.4
1,045,363	-	aroC	OKGIIK_04805	0.30	-0.7
1,045,363	-	aroC	OKGIIK_04805	0.30	-2.3
1,045,363	-	aroC	OKGIIK_04805	0.30	-0.4
1,045,363	-	aroC	OKGIIK_04805	0.30	-0.7
1,045,374	+	aroC	OKGIIK_04805	0.31	-0.4
1,045,374	+	aroC	OKGIIK_04805	0.31	-0.4
1,045,374	+	aroC	OKGIIK_04805	0.31	+0.3
1,045,374	+	aroC	OKGIIK_04805	0.31	-1.6
1,045,374	+	aroC	OKGIIK_04805	0.31	-1.2
1,045,375	-	aroC	OKGIIK_04805	0.31	-0.8
1,045,605	+	aroC	OKGIIK_04805	0.53	+0.8
1,045,605	+	aroC	OKGIIK_04805	0.53	-0.2
1,045,605	+	aroC	OKGIIK_04805	0.53	-1.5
1,045,605	+	aroC	OKGIIK_04805	0.53	-0.4
1,045,605	+	aroC	OKGIIK_04805	0.53	-1.0
1,045,606	-	aroC	OKGIIK_04805	0.53	-0.7
1,045,606	-	aroC	OKGIIK_04805	0.53	-0.7
1,045,606	-	aroC	OKGIIK_04805	0.53	-1.0
1,045,698	+	aroC	OKGIIK_04805	0.61	-0.4
1,045,821	+	aroC	OKGIIK_04805	0.72	-2.0
1,045,822	-	aroC	OKGIIK_04805	0.73	-0.4
1,045,835	+	aroC	OKGIIK_04805	0.74	-0.4