Experiment: R2A_PIPES pH 4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_03035 and OKGIIK_03040 are separated by 115 nucleotides OKGIIK_03040 and purE are separated by 133 nucleotides purE and purK overlap by 4 nucleotides
OKGIIK_03035: OKGIIK_03035 - hypothetical protein, at 688,631 to 691,780
_03035
OKGIIK_03040: OKGIIK_03040 - hypothetical protein, at 691,896 to 692,165
_03040
OKGIIK_03045: purE - Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase, at 692,299 to 692,736
purE
OKGIIK_03050: purK - 5-(carboxyamino)imidazole ribonucleotide synthase, at 692,733 to 693,923
purK
Position (kb) 691
692
693 Strain fitness (log2 ratio) -2
-1
0
1 at 691.140 kb on + strand, within OKGIIK_03035 at 691.140 kb on + strand, within OKGIIK_03035 at 691.140 kb on + strand, within OKGIIK_03035 at 691.140 kb on + strand, within OKGIIK_03035 at 691.141 kb on - strand, within OKGIIK_03035 at 691.141 kb on - strand, within OKGIIK_03035 at 691.141 kb on - strand, within OKGIIK_03035 at 691.141 kb on - strand, within OKGIIK_03035 at 691.167 kb on + strand, within OKGIIK_03035 at 691.167 kb on + strand, within OKGIIK_03035 at 691.167 kb on + strand, within OKGIIK_03035 at 691.168 kb on - strand, within OKGIIK_03035 at 691.168 kb on - strand, within OKGIIK_03035 at 691.168 kb on - strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.572 kb on + strand at 691.572 kb on + strand at 691.572 kb on + strand at 691.572 kb on + strand at 691.572 kb on + strand at 691.572 kb on + strand at 691.572 kb on + strand at 691.572 kb on + strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.837 kb on + strand at 691.837 kb on + strand at 691.838 kb on - strand at 691.838 kb on - strand at 691.846 kb on + strand at 691.847 kb on - strand at 691.847 kb on - strand at 691.860 kb on + strand at 691.897 kb on + strand at 691.897 kb on + strand at 691.898 kb on - strand at 691.898 kb on - strand at 691.978 kb on + strand, within OKGIIK_03040 at 691.978 kb on + strand, within OKGIIK_03040 at 691.978 kb on + strand, within OKGIIK_03040 at 691.978 kb on + strand, within OKGIIK_03040 at 691.978 kb on + strand, within OKGIIK_03040 at 691.979 kb on - strand, within OKGIIK_03040 at 691.979 kb on - strand, within OKGIIK_03040 at 691.979 kb on - strand, within OKGIIK_03040 at 691.979 kb on - strand, within OKGIIK_03040 at 692.204 kb on + strand at 692.204 kb on + strand at 692.205 kb on - strand at 692.205 kb on - strand at 692.755 kb on + strand at 692.755 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES pH 4 remove 691,140 + OKGIIK_03035 0.80 -0.7 691,140 + OKGIIK_03035 0.80 -0.7 691,140 + OKGIIK_03035 0.80 +0.0 691,140 + OKGIIK_03035 0.80 -0.4 691,141 - OKGIIK_03035 0.80 +0.3 691,141 - OKGIIK_03035 0.80 -0.2 691,141 - OKGIIK_03035 0.80 +0.0 691,141 - OKGIIK_03035 0.80 -1.2 691,167 + OKGIIK_03035 0.81 -2.3 691,167 + OKGIIK_03035 0.81 -0.5 691,167 + OKGIIK_03035 0.81 +0.3 691,168 - OKGIIK_03035 0.81 +0.6 691,168 - OKGIIK_03035 0.81 +1.1 691,168 - OKGIIK_03035 0.81 -0.9 691,185 + OKGIIK_03035 0.81 +0.1 691,185 + OKGIIK_03035 0.81 -1.5 691,185 + OKGIIK_03035 0.81 -0.1 691,185 + OKGIIK_03035 0.81 -1.6 691,185 + OKGIIK_03035 0.81 -1.0 691,185 + OKGIIK_03035 0.81 -0.7 691,185 + OKGIIK_03035 0.81 -2.4 691,185 + OKGIIK_03035 0.81 +0.0 691,185 + OKGIIK_03035 0.81 -0.6 691,185 + OKGIIK_03035 0.81 +0.2 691,186 - OKGIIK_03035 0.81 -0.7 691,186 - OKGIIK_03035 0.81 -1.4 691,186 - OKGIIK_03035 0.81 +1.3 691,186 - OKGIIK_03035 0.81 -0.7 691,186 - OKGIIK_03035 0.81 +1.0 691,186 - OKGIIK_03035 0.81 -0.5 691,186 - OKGIIK_03035 0.81 +0.1 691,186 - OKGIIK_03035 0.81 -0.5 691,186 - OKGIIK_03035 0.81 -1.5 691,186 - OKGIIK_03035 0.81 -0.6 691,572 + -0.2 691,572 + -0.2 691,572 + +1.0 691,572 + -0.6 691,572 + +0.8 691,572 + +0.3 691,572 + -0.2 691,572 + +0.3 691,573 - -0.8 691,573 - +1.3 691,573 - -0.2 691,573 - -0.5 691,573 - -1.2 691,573 - -1.8 691,573 - -0.2 691,573 - +1.3 691,573 - -0.7 691,573 - +0.3 691,573 - -1.4 691,573 - +1.0 691,573 - +0.0 691,573 - -0.2 691,573 - -1.4 691,573 - -2.0 691,573 - -0.2 691,837 + -1.1 691,837 + -1.1 691,838 - +1.6 691,838 - -0.8 691,846 + +0.3 691,847 - +0.3 691,847 - +0.3 691,860 + -1.5 691,897 + -0.5 691,897 + -0.3 691,898 - -1.6 691,898 - -0.2 691,978 + OKGIIK_03040 0.30 +1.5 691,978 + OKGIIK_03040 0.30 +1.0 691,978 + OKGIIK_03040 0.30 +0.3 691,978 + OKGIIK_03040 0.30 +0.3 691,978 + OKGIIK_03040 0.30 +0.3 691,979 - OKGIIK_03040 0.31 +1.2 691,979 - OKGIIK_03040 0.31 +0.4 691,979 - OKGIIK_03040 0.31 +0.3 691,979 - OKGIIK_03040 0.31 +0.9 692,204 + +0.9 692,204 + +0.3 692,205 - +0.9 692,205 - -0.7 692,755 + -0.4 692,755 + +0.6
Or see this region's nucleotide sequence