Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_00515

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
115,781	+		OKGIIK_00505	0.85	-0.8
115,781	+		OKGIIK_00505	0.85	+0.2
115,781	+		OKGIIK_00505	0.85	+0.6
115,781	+		OKGIIK_00505	0.85	-0.6
115,781	+		OKGIIK_00505	0.85	+0.5
115,781	+		OKGIIK_00505	0.85	+0.2
115,781	+		OKGIIK_00505	0.85	+1.2
115,781	+		OKGIIK_00505	0.85	-0.9
115,781	+		OKGIIK_00505	0.85	-0.6
115,781	+		OKGIIK_00505	0.85	-0.6
115,781	+		OKGIIK_00505	0.85	+0.0
115,781	+		OKGIIK_00505	0.85	-2.6
115,781	+		OKGIIK_00505	0.85	+1.2
115,781	+		OKGIIK_00505	0.85	+1.2
115,781	+		OKGIIK_00505	0.85	+1.6
115,781	+		OKGIIK_00505	0.85	-0.2
115,781	+		OKGIIK_00505	0.85	-0.9
115,781	+		OKGIIK_00505	0.85	-0.9
115,781	+		OKGIIK_00505	0.85	-0.5
115,782	-		OKGIIK_00505	0.85	-0.1
115,782	-		OKGIIK_00505	0.85	-0.1
115,782	-		OKGIIK_00505	0.85	-1.2
115,782	-		OKGIIK_00505	0.85	+0.9
115,782	-		OKGIIK_00505	0.85	+1.2
115,782	-		OKGIIK_00505	0.85	-0.1
115,782	-		OKGIIK_00505	0.85	-0.8
115,782	-		OKGIIK_00505	0.85	+0.6
115,782	-		OKGIIK_00505	0.85	-0.1
115,782	-		OKGIIK_00505	0.85	+0.9
115,782	-		OKGIIK_00505	0.85	+1.2
115,782	-		OKGIIK_00505	0.85	-0.1
115,782	-		OKGIIK_00505	0.85	-1.2
115,782	-		OKGIIK_00505	0.85	+0.2
115,782	-		OKGIIK_00505	0.85	-0.4
115,782	-		OKGIIK_00505	0.85	+0.2
115,782	-		OKGIIK_00505	0.85	+1.5
115,782	-		OKGIIK_00505	0.85	-0.5
115,782	-		OKGIIK_00505	0.85	-0.4
115,782	-		OKGIIK_00505	0.85	+1.8
115,787	-		OKGIIK_00505	0.85	-1.2
115,879	+		OKGIIK_00505	0.89	-1.4
115,879	+		OKGIIK_00505	0.89	+0.1
115,879	+		OKGIIK_00505	0.89	+0.4
115,880	-		OKGIIK_00505	0.89	-0.6
115,880	-		OKGIIK_00505	0.89	+1.8
115,880	-		OKGIIK_00505	0.89	+0.2
115,924	+				+0.3
115,924	+				-0.6
115,924	+				-1.1
115,925	-				+0.7
115,925	-				+0.2
115,925	-				-0.4
115,925	-				+0.2
115,925	-				+0.2
115,925	-				-1.0
115,925	-				+1.2
115,942	+				+0.4
115,945	+				-0.6
115,945	+				+1.7
115,945	+				-1.5
115,945	+				+0.6
115,946	-				-1.2
115,946	-				-0.1
115,946	-				-0.1
115,946	-				+0.1
115,946	-				+0.9
115,946	-				+1.0
116,014	+				+1.8
116,014	+				+1.2
116,014	+				+0.5
116,014	+				-0.4
116,015	-				+0.4
116,015	-				+1.9
116,015	-				-0.8
116,015	-				+0.2
116,015	-				-0.1
116,015	-				+0.6
116,015	-				-2.0
116,021	-				-0.8
116,384	+				+0.6
116,384	+				+0.6
116,384	+				-0.8
116,384	+				-0.7
116,384	+				+2.0
116,384	+				+0.2
116,384	+				-0.4
116,384	+				+0.2
116,385	-				+1.8
116,385	-				-1.8
116,385	-				+1.2
116,385	-				-0.1
116,385	-				-1.2
116,385	-				-1.1
116,385	-				-1.5
116,385	-				+0.2
116,385	-				+0.2
116,385	-				-0.4
116,385	-				-0.3
116,385	-				-0.5
116,385	-				-0.4
116,385	-				-1.1
116,470	+		OKGIIK_00510	0.25	-0.6
116,471	-		OKGIIK_00510	0.25	+1.2
116,471	-		OKGIIK_00510	0.25	+1.9
116,543	-		OKGIIK_00510	0.51	+1.6
116,638	+		OKGIIK_00510	0.85	+0.2
116,638	+		OKGIIK_00510	0.85	+0.6
116,638	+		OKGIIK_00510	0.85	-0.4
116,638	+		OKGIIK_00510	0.85	-0.9
116,639	-		OKGIIK_00510	0.85	+1.4
116,639	-		OKGIIK_00510	0.85	-0.2
116,639	-		OKGIIK_00510	0.85	-0.1
116,639	-		OKGIIK_00510	0.85	+1.8
116,735	-				+1.3
116,735	-				-0.7
116,735	-				-0.8
116,746	+				+0.9
116,747	-				-0.8
116,747	-				-0.1
116,747	-				+1.5
116,875	+				-0.1
116,875	+				+1.0
116,875	+				-1.8
116,875	+				+1.4
116,875	+				+0.6
116,875	+				+0.2
116,876	-				+0.3
116,917	+		OKGIIK_00515	0.12	+2.5
116,947	+		OKGIIK_00515	0.14	+0.7
116,948	-		OKGIIK_00515	0.14	+0.1
116,986	+		OKGIIK_00515	0.17	+2.5
116,986	+		OKGIIK_00515	0.17	-0.4
116,986	+		OKGIIK_00515	0.17	+1.4
116,986	+		OKGIIK_00515	0.17	+1.3
116,986	+		OKGIIK_00515	0.17	-2.2
116,986	+		OKGIIK_00515	0.17	-1.2
116,987	-		OKGIIK_00515	0.17	+2.6
116,987	-		OKGIIK_00515	0.17	-1.4
117,098	-		OKGIIK_00515	0.24	-0.1
117,105	-		OKGIIK_00515	0.24	-0.8
117,164	+		OKGIIK_00515	0.28	-1.4
117,164	+		OKGIIK_00515	0.28	+3.6
117,407	+		OKGIIK_00515	0.43	-0.1
117,424	+		OKGIIK_00515	0.44	-0.8
117,425	-		OKGIIK_00515	0.44	-0.4
117,457	+		OKGIIK_00515	0.46	+0.2
117,457	+		OKGIIK_00515	0.46	+0.8
117,457	+		OKGIIK_00515	0.46	+1.2
117,458	-		OKGIIK_00515	0.46	+0.2
117,458	-		OKGIIK_00515	0.46	-0.1
117,519	+		OKGIIK_00515	0.50	-0.1
117,538	+		OKGIIK_00515	0.51	-0.5
117,539	-		OKGIIK_00515	0.51	+0.4
117,539	-		OKGIIK_00515	0.51	+0.1
117,539	-		OKGIIK_00515	0.51	+1.6
117,539	-		OKGIIK_00515	0.51	-0.8
117,694	+		OKGIIK_00515	0.61	-0.1
117,694	+		OKGIIK_00515	0.61	+0.9
117,695	-		OKGIIK_00515	0.61	-0.9
117,695	-		OKGIIK_00515	0.61	+1.8
117,792	+		OKGIIK_00515	0.67	-0.1
117,793	-		OKGIIK_00515	0.67	-0.4
117,994	+		OKGIIK_00515	0.79	-1.7
117,994	+		OKGIIK_00515	0.79	+1.2
117,994	+		OKGIIK_00515	0.79	+0.9
117,994	+		OKGIIK_00515	0.79	+1.1
117,995	-		OKGIIK_00515	0.79	+1.0
117,995	-		OKGIIK_00515	0.79	-1.8
118,000	+		OKGIIK_00515	0.80	+1.2
118,000	+		OKGIIK_00515	0.80	-0.6
118,000	+		OKGIIK_00515	0.80	+1.6
118,000	+		OKGIIK_00515	0.80	-0.1
118,000	+		OKGIIK_00515	0.80	+0.4
118,000	+		OKGIIK_00515	0.80	+0.6
118,000	+		OKGIIK_00515	0.80	+0.0
118,000	+		OKGIIK_00515	0.80	+0.6
118,000	+		OKGIIK_00515	0.80	-1.2
118,000	+		OKGIIK_00515	0.80	-0.6
118,000	+		OKGIIK_00515	0.80	-0.2
118,001	-		OKGIIK_00515	0.80	+0.1
118,001	-		OKGIIK_00515	0.80	-0.6
118,001	-		OKGIIK_00515	0.80	+1.0
118,001	-		OKGIIK_00515	0.80	-0.1
118,001	-		OKGIIK_00515	0.80	-0.4
118,001	-		OKGIIK_00515	0.80	+0.9
118,001	-		OKGIIK_00515	0.80	+0.2
118,001	-		OKGIIK_00515	0.80	+0.9
118,001	-		OKGIIK_00515	0.80	+0.6
118,001	-		OKGIIK_00515	0.80	-0.2
118,001	-		OKGIIK_00515	0.80	-0.8
118,001	-		OKGIIK_00515	0.80	-0.8
118,027	+		OKGIIK_00515	0.81	-0.1
118,027	+		OKGIIK_00515	0.81	-1.6
118,028	-		OKGIIK_00515	0.81	-0.5
118,028	-		OKGIIK_00515	0.81	+0.5
118,028	-		OKGIIK_00515	0.81	+0.1
118,028	-		OKGIIK_00515	0.81	-1.2
118,028	-		OKGIIK_00515	0.81	+1.0
118,180	+				+0.3
118,180	+				+1.2
118,180	+				+0.3
118,180	+				+1.6
118,181	-				+1.2
118,181	-				-0.4
118,377	-				-0.6
118,377	-				+0.2
118,377	-				+0.9
118,526	+		OKGIIK_00520	0.36	-1.7
118,527	-		OKGIIK_00520	0.36	-0.8
118,527	-		OKGIIK_00520	0.36	-1.2
118,667	+		OKGIIK_00520	0.62	+1.1
118,667	+		OKGIIK_00520	0.62	+0.2
118,667	+		OKGIIK_00520	0.62	-1.4
118,667	+		OKGIIK_00520	0.62	+0.4
118,667	+		OKGIIK_00520	0.62	+0.2
118,667	+		OKGIIK_00520	0.62	+0.6
118,667	+		OKGIIK_00520	0.62	-0.6
118,667	+		OKGIIK_00520	0.62	+1.5
118,667	+		OKGIIK_00520	0.62	+1.5
118,698	-		OKGIIK_00520	0.68	+1.5
118,727	+		OKGIIK_00520	0.74	-1.2
118,728	-		OKGIIK_00520	0.74	-1.1
118,975	+		OKGIIK_00525	0.14	-1.2
118,975	+		OKGIIK_00525	0.14	-0.1
118,976	-		OKGIIK_00525	0.14	+1.4