Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_00105

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
22,347	+	ybeD	OKGIIK_00095	0.50	-0.5
22,348	-	ybeD	OKGIIK_00095	0.50	-0.8
22,348	-	ybeD	OKGIIK_00095	0.50	-1.3
22,348	-	ybeD	OKGIIK_00095	0.50	-1.1
22,436	+	ybeD	OKGIIK_00095	0.80	-0.1
22,436	+	ybeD	OKGIIK_00095	0.80	-1.5
22,437	-	ybeD	OKGIIK_00095	0.81	-2.0
22,437	-	ybeD	OKGIIK_00095	0.81	+0.3
22,437	-	ybeD	OKGIIK_00095	0.81	-1.1
22,481	+				-1.8
22,546	+				+1.2
22,546	+				-1.8
22,546	+				-1.5
22,546	+				-1.3
22,546	+				-0.8
22,547	-				-1.8
22,547	-				-1.5
22,547	-				-0.8
22,547	-				-0.5
22,580	+				-3.1
22,580	+				-0.8
22,580	+				-0.5
22,580	+				-1.0
22,580	+				+1.8
22,580	+				-0.8
22,580	+				-0.8
22,580	+				-0.5
22,580	+				-0.1
22,580	+				-1.8
22,580	+				-1.6
22,580	+				-0.8
22,580	+				-0.5
22,580	+				+0.7
22,580	+				+0.1
22,580	+				-2.4
22,580	+				+1.2
22,580	+				-1.5
22,580	+				-1.8
22,580	+				+0.5
22,580	+				-2.1
22,580	+				-0.5
22,580	+				-1.8
22,580	+				-0.8
22,580	+				-0.8
22,580	+				-2.6
22,580	+				-1.2
22,580	+				+0.5
22,581	-				+0.9
22,581	-				-0.1
22,581	-				-0.6
22,581	-				-0.1
22,581	-				-1.1
22,581	-				+1.1
22,581	-				-2.3
22,581	-				-0.2
22,581	-				+0.8
22,581	-				-1.1
22,581	-				-1.5
22,581	-				-1.9
22,848	+	lipB	OKGIIK_00100	0.36	+0.3
22,848	+	lipB	OKGIIK_00100	0.36	-0.8
22,848	+	lipB	OKGIIK_00100	0.36	-0.9
22,848	+	lipB	OKGIIK_00100	0.36	-1.1
22,848	+	lipB	OKGIIK_00100	0.36	+0.4
22,848	+	lipB	OKGIIK_00100	0.36	-2.1
22,848	+	lipB	OKGIIK_00100	0.36	-0.1
22,848	+	lipB	OKGIIK_00100	0.36	-1.9
22,848	+	lipB	OKGIIK_00100	0.36	-0.5
22,848	+	lipB	OKGIIK_00100	0.36	-0.8
22,848	+	lipB	OKGIIK_00100	0.36	-1.3
22,848	+	lipB	OKGIIK_00100	0.36	-0.8
22,849	-	lipB	OKGIIK_00100	0.37	-2.3
22,849	-	lipB	OKGIIK_00100	0.37	+0.5
22,849	-	lipB	OKGIIK_00100	0.37	-1.8
22,849	-	lipB	OKGIIK_00100	0.37	-1.5
22,849	-	lipB	OKGIIK_00100	0.37	-1.8
23,007	+	lipB	OKGIIK_00100	0.59	-1.5
23,007	+	lipB	OKGIIK_00100	0.59	-2.2
23,007	+	lipB	OKGIIK_00100	0.59	+0.5
23,007	+	lipB	OKGIIK_00100	0.59	-1.9
23,007	+	lipB	OKGIIK_00100	0.59	-1.2
23,007	+	lipB	OKGIIK_00100	0.59	-0.8
23,007	+	lipB	OKGIIK_00100	0.59	+0.5
23,007	+	lipB	OKGIIK_00100	0.59	-0.5
23,007	+	lipB	OKGIIK_00100	0.59	+0.1
23,007	+	lipB	OKGIIK_00100	0.59	-1.1
23,007	+	lipB	OKGIIK_00100	0.59	-0.5
23,007	+	lipB	OKGIIK_00100	0.59	-0.5
23,007	+	lipB	OKGIIK_00100	0.59	-0.6
23,007	+	lipB	OKGIIK_00100	0.59	-2.2
23,008	-	lipB	OKGIIK_00100	0.59	-0.8
23,008	-	lipB	OKGIIK_00100	0.59	-1.3
23,008	-	lipB	OKGIIK_00100	0.59	-1.3
23,008	-	lipB	OKGIIK_00100	0.59	-0.1
23,008	-	lipB	OKGIIK_00100	0.59	-1.6
23,008	-	lipB	OKGIIK_00100	0.59	-2.3
23,008	-	lipB	OKGIIK_00100	0.59	-1.5
23,008	-	lipB	OKGIIK_00100	0.59	+0.5
23,008	-	lipB	OKGIIK_00100	0.59	-0.4
23,130	+	lipB	OKGIIK_00100	0.77	-0.5
23,130	+	lipB	OKGIIK_00100	0.77	+1.5
23,130	+	lipB	OKGIIK_00100	0.77	+0.1
23,131	-	lipB	OKGIIK_00100	0.77	-1.3
23,158	+	lipB	OKGIIK_00100	0.81	-0.8
23,158	+	lipB	OKGIIK_00100	0.81	-1.5
23,158	+	lipB	OKGIIK_00100	0.81	-1.8
23,158	+	lipB	OKGIIK_00100	0.81	-0.8
23,158	+	lipB	OKGIIK_00100	0.81	-1.1
23,158	+	lipB	OKGIIK_00100	0.81	-0.8
23,159	-	lipB	OKGIIK_00100	0.81	-0.9
23,159	-	lipB	OKGIIK_00100	0.81	+0.2
23,159	-	lipB	OKGIIK_00100	0.81	-1.1
23,159	-	lipB	OKGIIK_00100	0.81	-2.2
23,159	-	lipB	OKGIIK_00100	0.81	-2.3
23,159	-	lipB	OKGIIK_00100	0.81	-1.5
23,159	-	lipB	OKGIIK_00100	0.81	+0.4
23,298	+				-0.3
23,298	+				+1.2
23,298	+				-0.6
23,298	+				-1.1
23,298	+				+0.7
23,298	+				-0.6
23,298	+				-0.6
23,298	+				-2.1
23,298	+				+0.5
23,298	+				-2.1
23,298	+				-0.5
23,298	+				-1.4
23,298	+				+1.3
23,298	+				-0.8
23,298	+				-1.6
23,298	+				-0.8
23,298	+				-0.7
23,298	+				-0.5
23,298	+				+0.9
23,298	+				+1.3
23,298	+				-0.8
23,298	+				-0.8
23,298	+				-1.1
23,298	+				-1.9
23,298	+				-3.2
23,298	+				+0.0
23,298	+				-1.2
23,298	+				-1.1
23,298	+				-1.6
23,299	-				-0.8
23,299	-				-0.5
23,299	-				-1.3
23,299	-				-0.5
23,299	-				+0.3
23,299	-				-0.8
23,299	-				-1.6
23,299	-				-0.8
23,299	-				-0.5
23,299	-				-1.6
23,299	-				-1.5
23,718	+	lipA	OKGIIK_00105	0.41	-1.6
23,718	+	lipA	OKGIIK_00105	0.41	-0.8
23,718	+	lipA	OKGIIK_00105	0.41	-0.8
23,718	+	lipA	OKGIIK_00105	0.41	-0.6
23,718	+	lipA	OKGIIK_00105	0.41	-1.0
23,718	+	lipA	OKGIIK_00105	0.41	-1.3
23,718	+	lipA	OKGIIK_00105	0.41	-1.6
23,718	+	lipA	OKGIIK_00105	0.41	+0.2
23,718	+	lipA	OKGIIK_00105	0.41	-1.1
23,718	+	lipA	OKGIIK_00105	0.41	-1.2
23,718	+	lipA	OKGIIK_00105	0.41	+0.5
23,718	+	lipA	OKGIIK_00105	0.41	-0.9
23,718	+	lipA	OKGIIK_00105	0.41	-1.6
23,719	-	lipA	OKGIIK_00105	0.41	-1.1
23,719	-	lipA	OKGIIK_00105	0.41	-0.3
23,719	-	lipA	OKGIIK_00105	0.41	-0.8
23,719	-	lipA	OKGIIK_00105	0.41	-1.3
23,940	+	lipA	OKGIIK_00105	0.63	-2.5
23,967	+	lipA	OKGIIK_00105	0.66	-0.8
23,967	+	lipA	OKGIIK_00105	0.66	-0.5
23,967	+	lipA	OKGIIK_00105	0.66	-1.9
23,967	+	lipA	OKGIIK_00105	0.66	-0.5
23,967	+	lipA	OKGIIK_00105	0.66	-0.8
23,968	-	lipA	OKGIIK_00105	0.66	+0.2
24,070	+	lipA	OKGIIK_00105	0.76	+0.5
24,070	+	lipA	OKGIIK_00105	0.76	-1.6
24,070	+	lipA	OKGIIK_00105	0.76	-1.9
24,070	+	lipA	OKGIIK_00105	0.76	-1.3
24,070	+	lipA	OKGIIK_00105	0.76	-0.1
24,070	+	lipA	OKGIIK_00105	0.76	-0.8
24,070	+	lipA	OKGIIK_00105	0.76	-0.5
24,071	-	lipA	OKGIIK_00105	0.76	-2.2
24,071	-	lipA	OKGIIK_00105	0.76	-1.1
24,071	-	lipA	OKGIIK_00105	0.76	+1.1
24,071	-	lipA	OKGIIK_00105	0.76	-1.2
24,129	+	lipA	OKGIIK_00105	0.82	-2.3
24,129	+	lipA	OKGIIK_00105	0.82	-2.2
24,129	+	lipA	OKGIIK_00105	0.82	-1.9
24,129	+	lipA	OKGIIK_00105	0.82	-1.1
24,129	+	lipA	OKGIIK_00105	0.82	-0.7
24,129	+	lipA	OKGIIK_00105	0.82	-0.8
24,129	+	lipA	OKGIIK_00105	0.82	-0.5
24,130	-	lipA	OKGIIK_00105	0.82	-1.5
24,130	-	lipA	OKGIIK_00105	0.82	-0.8
24,130	-	lipA	OKGIIK_00105	0.82	-1.7
24,130	-	lipA	OKGIIK_00105	0.82	-0.5
24,130	-	lipA	OKGIIK_00105	0.82	-1.6
24,261	+				-1.3
24,262	-				-0.5
24,500	+				-1.1
24,501	-				+0.1
24,552	-	ctpA	OKGIIK_00110	0.10	-0.5
24,552	-	ctpA	OKGIIK_00110	0.10	-1.5
24,687	-	ctpA	OKGIIK_00110	0.16	+0.5
24,716	+	ctpA	OKGIIK_00110	0.18	-0.1
24,717	-	ctpA	OKGIIK_00110	0.18	-1.5
24,717	-	ctpA	OKGIIK_00110	0.18	-0.5
24,717	-	ctpA	OKGIIK_00110	0.18	-0.8
24,717	-	ctpA	OKGIIK_00110	0.18	-2.4
24,717	-	ctpA	OKGIIK_00110	0.18	+0.3
24,717	-	ctpA	OKGIIK_00110	0.18	-0.9
24,767	+	ctpA	OKGIIK_00110	0.20	-0.5
24,767	+	ctpA	OKGIIK_00110	0.20	-0.8
24,767	+	ctpA	OKGIIK_00110	0.20	+0.5
24,768	-	ctpA	OKGIIK_00110	0.20	-1.9
24,768	-	ctpA	OKGIIK_00110	0.20	-0.5
25,014	-	ctpA	OKGIIK_00110	0.31	-0.1
25,103	+	ctpA	OKGIIK_00110	0.35	-1.9