Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23185

Experiment: Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)
4,417,034	-				+0.4
4,417,044	+				+0.2
4,417,046	+				-1.6
4,417,046	+				-0.6
4,417,046	+				-0.5
4,417,047	-				+0.0
4,417,047	-				-1.6
4,417,047	-				+0.1
4,417,111	+				-0.2
4,417,112	-				+0.3
4,417,139	-				+1.3
4,417,146	-				+0.9
4,417,164	-				-2.0
4,417,207	-				+0.3
4,417,303	+		LU632_RS23175	0.10	-0.4
4,417,303	+		LU632_RS23175	0.10	-0.6
4,417,303	+		LU632_RS23175	0.10	+3.2
4,417,303	+		LU632_RS23175	0.10	+0.6
4,417,303	+		LU632_RS23175	0.10	+0.2
4,417,304	-		LU632_RS23175	0.10	+0.4
4,417,304	-		LU632_RS23175	0.10	+1.2
4,417,304	-		LU632_RS23175	0.10	+0.6
4,417,304	-		LU632_RS23175	0.10	-0.0
4,417,304	-		LU632_RS23175	0.10	-1.4
4,417,392	-		LU632_RS23175	0.43	-0.4
4,417,648	-		LU632_RS23180	0.19	-0.3
4,417,691	+		LU632_RS23180	0.66	+0.8
4,417,691	+		LU632_RS23180	0.66	+0.3
4,417,752	+				-0.3
4,417,752	+				-0.1
4,417,849	+				+1.2
4,417,862	+				+1.5
4,419,305	+				-2.7
4,419,312	+				-0.3
4,419,312	+				-0.1
4,419,326	-				+0.6
4,419,397	+				+0.7
4,419,397	+				-2.0
4,419,397	+				-0.6
4,419,672	+		LU632_RS23190	0.31	+1.2
4,419,673	-		LU632_RS23190	0.31	+4.2
4,419,673	-		LU632_RS23190	0.31	-0.2
4,419,698	-		LU632_RS23190	0.35	+0.6
4,419,848	+		LU632_RS23190	0.58	+0.6
4,419,919	-		LU632_RS23190	0.69	-0.6
4,419,923	+		LU632_RS23190	0.70	+0.3