Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS20125

Experiment: Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)
3,831,765	+				+0.1
3,831,854	+				-0.0
3,831,905	+				+0.4
3,831,905	+				-1.5
3,831,905	+				-1.2
3,831,943	+		LU632_RS20120	0.11	-0.7
3,832,302	-		LU632_RS20120	0.58	-0.5
3,832,454	+		LU632_RS20120	0.78	+1.6
3,832,454	+		LU632_RS20120	0.78	+2.1
3,832,459	-		LU632_RS20120	0.78	-0.2
3,832,577	-				-0.7
3,832,614	-				-0.2
3,832,614	-				+0.5
3,832,615	+				+1.7
3,832,698	-				-0.5
3,832,724	+		LU632_RS20125	0.11	-1.5
3,832,788	-		LU632_RS20125	0.18	-1.2
3,832,925	+		LU632_RS20125	0.33	+0.1
3,832,966	+		LU632_RS20125	0.37	+2.1
3,832,967	-		LU632_RS20125	0.37	+0.0
3,832,982	+		LU632_RS20125	0.39	-0.5
3,832,992	-		LU632_RS20125	0.40	+1.1
3,833,282	+		LU632_RS20125	0.71	-0.1
3,833,543	-				-1.4
3,833,555	+				-0.2
3,833,597	-				-0.5
3,833,616	+				-1.0
3,833,617	-				+1.3
3,833,633	+				+1.3
3,833,633	+				+0.2
3,833,635	-				-0.2
3,833,683	-				-0.2
3,833,938	-	can	LU632_RS20130	0.42	+0.1
3,834,033	-	can	LU632_RS20130	0.57	+0.5
3,834,336	-				-0.4
3,834,482	-	hpt	LU632_RS20135	0.18	+1.1
3,834,492	+	hpt	LU632_RS20135	0.20	+0.1
3,834,493	-	hpt	LU632_RS20135	0.20	-0.1
3,834,493	-	hpt	LU632_RS20135	0.20	+0.5
3,834,493	-	hpt	LU632_RS20135	0.20	+0.1
3,834,541	+	hpt	LU632_RS20135	0.29	+1.7
3,834,541	+	hpt	LU632_RS20135	0.29	-1.4
3,834,542	-	hpt	LU632_RS20135	0.30	+1.4
3,834,542	-	hpt	LU632_RS20135	0.30	+0.5
3,834,542	-	hpt	LU632_RS20135	0.30	+0.9
3,834,545	+	hpt	LU632_RS20135	0.30	-1.3