Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17825

Experiment: Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)
3,356,831	-				-1.5
3,356,850	-				-2.3
3,356,850	-				-0.3
3,356,870	+				-0.4
3,356,877	-				+0.7
3,356,878	-				-0.2
3,356,928	-				-0.2
3,357,039	-	ndk	LU632_RS17820	0.26	-2.4
3,357,039	-	ndk	LU632_RS17820	0.26	-3.2
3,357,207	-	ndk	LU632_RS17820	0.65	-2.6
3,357,328	+				-4.7
3,357,342	+				-4.1
3,357,352	-				-3.1
3,357,379	+				-1.1
3,357,379	+				-1.5
3,357,380	-				+0.8
3,357,380	-				+1.1
3,357,557	-				-0.2
3,357,573	+				+0.4
3,357,574	-				+1.3
3,357,713	-				+1.2
3,359,278	+				-0.3
3,359,279	-				-0.4
3,359,303	-				+0.4
3,359,717	-		LU632_RS17830	0.52	-0.2
3,359,841	+		LU632_RS17830	0.69	-0.2
3,359,913	+		LU632_RS17830	0.79	-6.1