Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17470

Experiment: Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)
3,286,106	+				-1.6
3,286,106	+				-0.6
3,286,286	+	mepS	LU632_RS17465	0.29	-2.8
3,286,287	-	mepS	LU632_RS17465	0.29	-1.2
3,286,293	-	mepS	LU632_RS17465	0.30	-1.0
3,286,324	+	mepS	LU632_RS17465	0.35	-1.4
3,286,351	-	mepS	LU632_RS17465	0.40	-1.2
3,286,351	-	mepS	LU632_RS17465	0.40	-0.5
3,286,351	-	mepS	LU632_RS17465	0.40	-0.8
3,286,473	+	mepS	LU632_RS17465	0.61	-1.9
3,286,474	-	mepS	LU632_RS17465	0.61	-1.2
3,286,548	-	mepS	LU632_RS17465	0.74	-1.6
3,286,604	-	mepS	LU632_RS17465	0.84	-1.3
3,286,664	+				-1.0
3,286,664	+				-1.4
3,286,664	+				-1.6
3,286,665	-				-2.1
3,286,665	-				-1.0
3,286,666	+				-1.1
3,286,666	+				-1.1
3,286,666	+				-1.1
3,286,666	+				-1.1
3,286,666	+				-0.6
3,286,666	+				-1.4
3,286,666	+				-1.2
3,286,667	-				-1.4
3,286,667	-				-0.5
3,286,667	-				-1.6
3,286,667	-				-1.2
3,286,667	-				-0.9
3,286,667	-				-1.6
3,286,667	-				-1.1
3,286,667	-				-0.7
3,286,667	-				-1.5
3,286,667	-				-1.1
3,286,667	-				-1.3
3,286,667	-				-2.4
3,286,667	-				-1.1
3,286,667	-				-0.8
3,286,669	-				-1.0
3,286,669	-				-1.3
3,286,742	-				+0.2
3,286,764	+				-1.6
3,287,036	+				+0.7
3,287,036	+				-2.9
3,287,912	+				-2.0
3,288,044	-		LU632_RS17480	0.35	-0.7
3,288,044	-		LU632_RS17480	0.35	-0.4
3,288,046	-		LU632_RS17480	0.36	-0.9
3,288,046	-		LU632_RS17480	0.36	-0.8
3,288,062	-		LU632_RS17480	0.44	+0.0
3,288,116	+		LU632_RS17480	0.69	-0.8
3,288,117	-		LU632_RS17480	0.69	+0.5
3,288,205	-				+2.2
3,288,273	+				+0.0
3,288,274	-				+0.6
3,288,274	-				+1.8
3,288,332	+				+0.9
3,288,333	-				+0.2
3,288,341	+				+1.0
3,288,341	+				+0.5
3,288,341	+				+0.1
3,288,342	-				-1.2
3,288,342	-				-1.4
3,288,342	-				-2.2
3,288,342	-				+0.5
3,288,342	-				+1.6
3,288,342	-				+1.1
3,288,346	-				-0.0
3,288,346	-				+1.2
3,288,373	+				-0.1
3,288,428	-				+2.2
3,288,428	-				-0.1
3,288,430	+				-1.1
3,288,431	-				+0.0
3,288,441	+				+0.6
3,288,442	-				+3.1
3,288,467	+				+0.8
3,288,513	+		LU632_RS17485	0.18	+2.7