Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16920

Experiment: Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)
3,185,631	-				-0.5
3,186,380	+				+2.9
3,186,381	-				+0.3
3,186,428	-				-1.3
3,186,444	-				+1.2
3,186,533	+				-0.7
3,186,562	+				-1.1
3,186,562	+				+1.0
3,186,629	-				+0.0
3,186,737	+				-0.2
3,186,738	-				+0.2
3,186,738	-				+0.7
3,186,881	-		LU632_RS16920	0.11	-0.1
3,187,015	-		LU632_RS16920	0.16	+0.5
3,187,018	+		LU632_RS16920	0.16	+0.2
3,187,018	+		LU632_RS16920	0.16	+0.8
3,187,018	+		LU632_RS16920	0.16	-0.8
3,187,066	+		LU632_RS16920	0.18	+1.2
3,187,066	+		LU632_RS16920	0.18	-0.0
3,187,117	+		LU632_RS16920	0.20	+0.6
3,187,117	+		LU632_RS16920	0.20	+2.5
3,187,125	+		LU632_RS16920	0.20	-1.1
3,187,125	+		LU632_RS16920	0.20	-0.2
3,187,252	+		LU632_RS16920	0.25	+1.6
3,187,252	+		LU632_RS16920	0.25	+0.2
3,187,377	+		LU632_RS16920	0.30	+0.9
3,187,377	+		LU632_RS16920	0.30	+0.3
3,187,430	+		LU632_RS16920	0.32	+0.8
3,187,430	+		LU632_RS16920	0.32	+0.3
3,187,431	-		LU632_RS16920	0.32	+0.7
3,187,431	-		LU632_RS16920	0.32	+0.3
3,187,444	-		LU632_RS16920	0.32	-0.0
3,187,467	+		LU632_RS16920	0.33	-2.2
3,187,467	+		LU632_RS16920	0.33	-2.9
3,187,471	+		LU632_RS16920	0.33	-0.4
3,187,472	-		LU632_RS16920	0.33	-0.0
3,187,472	-		LU632_RS16920	0.33	+1.5
3,187,510	-		LU632_RS16920	0.35	+0.7
3,187,510	-		LU632_RS16920	0.35	+0.9
3,187,510	-		LU632_RS16920	0.35	-0.5
3,187,515	+		LU632_RS16920	0.35	-1.5
3,187,515	+		LU632_RS16920	0.35	-0.3
3,187,515	+		LU632_RS16920	0.35	+1.2
3,187,629	+		LU632_RS16920	0.39	+0.0
3,187,629	+		LU632_RS16920	0.39	+0.5
3,187,697	+		LU632_RS16920	0.42	-2.3
3,187,698	-		LU632_RS16920	0.42	+0.4
3,187,894	+		LU632_RS16920	0.49	+1.2
3,187,895	-		LU632_RS16920	0.49	+0.6
3,187,895	-		LU632_RS16920	0.49	+0.5
3,187,900	+		LU632_RS16920	0.49	-2.7
3,187,981	-		LU632_RS16920	0.52	-1.3
3,188,032	+		LU632_RS16920	0.54	-0.3
3,188,032	+		LU632_RS16920	0.54	+0.5
3,188,064	-		LU632_RS16920	0.56	-0.2
3,188,095	-		LU632_RS16920	0.57	+1.1
3,188,153	-		LU632_RS16920	0.59	-0.9
3,188,252	-		LU632_RS16920	0.63	+0.1
3,188,252	-		LU632_RS16920	0.63	+0.7
3,188,253	+		LU632_RS16920	0.63	+0.1
3,188,253	+		LU632_RS16920	0.63	+1.1
3,188,253	+		LU632_RS16920	0.63	+0.0
3,188,355	+		LU632_RS16920	0.67	+0.8
3,188,355	+		LU632_RS16920	0.67	-0.4
3,188,366	-		LU632_RS16920	0.67	+0.6
3,188,368	+		LU632_RS16920	0.67	+0.1
3,188,368	+		LU632_RS16920	0.67	+0.3
3,188,369	-		LU632_RS16920	0.67	+1.0
3,188,369	-		LU632_RS16920	0.67	+1.0
3,188,371	-		LU632_RS16920	0.67	-0.2
3,188,523	+		LU632_RS16920	0.73	+1.0
3,188,523	+		LU632_RS16920	0.73	+0.9
3,188,524	-		LU632_RS16920	0.73	-0.2
3,188,524	-		LU632_RS16920	0.73	-1.6
3,188,524	-		LU632_RS16920	0.73	+0.1
3,188,524	-		LU632_RS16920	0.73	+0.3
3,188,524	-		LU632_RS16920	0.73	-0.5
3,188,524	-		LU632_RS16920	0.73	-0.4
3,188,563	+		LU632_RS16920	0.74	-1.3
3,188,666	-		LU632_RS16920	0.78	+2.2
3,188,828	+		LU632_RS16920	0.84	+0.8
3,188,852	-		LU632_RS16920	0.85	-0.7
3,188,939	-		LU632_RS16920	0.88	+0.4
3,188,953	-		LU632_RS16920	0.89	-0.7
3,188,987	-				-0.1
3,188,987	-				-0.2
3,189,015	+				+0.1
3,189,093	+				+0.5
3,189,093	+				+0.4
3,189,138	+				-1.3
3,189,138	+				+1.6
3,189,138	+				-0.7
3,189,213	+				+2.3
3,189,214	-				-1.4
3,189,214	-				+1.2
3,189,214	-				+0.1
3,189,217	+				+0.7
3,189,217	+				-0.1
3,189,218	-				+1.5
3,189,320	+				+1.4