Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13560

Experiment: Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)
2,588,438	-				+1.8
2,588,543	+				-0.6
2,588,543	+				-1.0
2,588,543	+				-1.3
2,588,543	+				-0.1
2,588,543	+				+0.3
2,588,544	-				-0.4
2,588,584	+				-1.6
2,588,584	+				+0.5
2,588,607	-				-1.2
2,588,709	-				-0.3
2,588,846	+	cheW	LU632_RS13555	0.15	-0.6
2,588,846	+	cheW	LU632_RS13555	0.15	+1.7
2,588,846	+	cheW	LU632_RS13555	0.15	+0.1
2,588,846	+	cheW	LU632_RS13555	0.15	+1.7
2,588,846	+	cheW	LU632_RS13555	0.15	+0.0
2,588,847	-	cheW	LU632_RS13555	0.16	+1.7
2,588,952	+	cheW	LU632_RS13555	0.37	-1.1
2,588,953	-	cheW	LU632_RS13555	0.37	+0.6
2,588,969	+	cheW	LU632_RS13555	0.40	+0.9
2,588,969	+	cheW	LU632_RS13555	0.40	-0.1
2,588,970	-	cheW	LU632_RS13555	0.40	-2.3
2,588,973	+	cheW	LU632_RS13555	0.41	-2.3
2,588,973	+	cheW	LU632_RS13555	0.41	-2.3
2,588,974	-	cheW	LU632_RS13555	0.41	-0.1
2,588,974	-	cheW	LU632_RS13555	0.41	-0.7
2,589,014	+	cheW	LU632_RS13555	0.49	+1.0
2,589,020	+	cheW	LU632_RS13555	0.50	-0.4
2,589,021	-	cheW	LU632_RS13555	0.51	+1.2
2,589,048	-	cheW	LU632_RS13555	0.56	+1.8
2,589,105	-	cheW	LU632_RS13555	0.67	-0.1
2,589,105	-	cheW	LU632_RS13555	0.67	-3.2
2,589,105	-	cheW	LU632_RS13555	0.67	+1.0
2,589,116	+	cheW	LU632_RS13555	0.70	-0.1
2,589,266	+				+0.1
2,589,266	+				+1.7
2,589,266	+				+0.6
2,589,267	-				-0.0
2,589,267	-				+0.3
2,589,267	-				-0.6
2,589,270	+				-0.5
2,589,270	+				+0.8
2,589,270	+				+0.3
2,589,270	+				-0.3
2,589,273	-				+0.9
2,589,287	+				+1.2
2,589,514	-	cheA	LU632_RS13560	0.11	-2.9
2,589,555	+	cheA	LU632_RS13560	0.13	-0.8
2,589,555	+	cheA	LU632_RS13560	0.13	+0.6
2,589,555	+	cheA	LU632_RS13560	0.13	-2.3
2,589,556	-	cheA	LU632_RS13560	0.13	+0.6
2,589,583	+	cheA	LU632_RS13560	0.15	+0.7
2,589,583	+	cheA	LU632_RS13560	0.15	+0.2
2,589,583	+	cheA	LU632_RS13560	0.15	+1.7
2,589,583	+	cheA	LU632_RS13560	0.15	+0.9
2,589,584	-	cheA	LU632_RS13560	0.15	+0.9
2,589,699	+	cheA	LU632_RS13560	0.20	-0.2
2,589,968	+	cheA	LU632_RS13560	0.34	+0.5
2,589,968	+	cheA	LU632_RS13560	0.34	-0.3
2,589,968	+	cheA	LU632_RS13560	0.34	+0.6
2,589,968	+	cheA	LU632_RS13560	0.34	-0.9
2,589,969	-	cheA	LU632_RS13560	0.34	+0.2
2,590,010	+	cheA	LU632_RS13560	0.36	+0.1
2,590,011	-	cheA	LU632_RS13560	0.36	-0.8
2,590,017	-	cheA	LU632_RS13560	0.36	+0.5
2,590,017	-	cheA	LU632_RS13560	0.36	+0.5
2,590,047	-	cheA	LU632_RS13560	0.38	+0.6
2,590,148	+	cheA	LU632_RS13560	0.43	-0.1
2,590,149	-	cheA	LU632_RS13560	0.43	+2.0
2,590,264	+	cheA	LU632_RS13560	0.49	+0.4
2,590,265	-	cheA	LU632_RS13560	0.49	+0.0
2,590,533	-	cheA	LU632_RS13560	0.62	+0.6
2,590,797	-	cheA	LU632_RS13560	0.76	+0.9
2,590,934	+	cheA	LU632_RS13560	0.82	+0.7
2,590,934	+	cheA	LU632_RS13560	0.82	-0.4
2,590,934	+	cheA	LU632_RS13560	0.82	+0.7
2,590,935	-	cheA	LU632_RS13560	0.83	-0.3
2,590,935	-	cheA	LU632_RS13560	0.83	+0.5
2,590,935	-	cheA	LU632_RS13560	0.83	-2.6
2,590,935	-	cheA	LU632_RS13560	0.83	-1.0
2,590,935	-	cheA	LU632_RS13560	0.83	+1.4
2,590,935	-	cheA	LU632_RS13560	0.83	-0.1
2,590,936	+	cheA	LU632_RS13560	0.83	-0.0
2,590,937	-	cheA	LU632_RS13560	0.83	-0.3
2,591,030	+	cheA	LU632_RS13560	0.87	-1.0
2,591,093	+				-0.8
2,591,094	-				+0.4
2,591,362	+				-0.3
2,591,370	+				+1.4
2,591,370	+				+0.1
2,591,370	+				-2.6
2,591,370	+				+0.3
2,591,371	-				+0.2
2,591,371	-				-0.7
2,591,371	-				+0.0
2,591,413	-	motB	LU632_RS13565	0.12	-0.2
2,591,706	+	motB	LU632_RS13565	0.40	-0.1
2,591,770	-	motB	LU632_RS13565	0.46	+0.5
2,591,777	-	motB	LU632_RS13565	0.46	-1.3
2,591,778	+	motB	LU632_RS13565	0.47	-2.0
2,591,778	+	motB	LU632_RS13565	0.47	+0.1
2,591,779	-	motB	LU632_RS13565	0.47	+0.4
2,591,779	-	motB	LU632_RS13565	0.47	+0.2
2,591,821	-	motB	LU632_RS13565	0.51	-0.1
2,591,821	-	motB	LU632_RS13565	0.51	-0.4
2,591,822	+	motB	LU632_RS13565	0.51	+0.4
2,591,822	+	motB	LU632_RS13565	0.51	+0.1
2,591,822	+	motB	LU632_RS13565	0.51	-0.9
2,591,822	+	motB	LU632_RS13565	0.51	-0.7
2,591,822	+	motB	LU632_RS13565	0.51	+0.1
2,591,823	-	motB	LU632_RS13565	0.51	+0.4
2,591,914	-	motB	LU632_RS13565	0.60	+0.3
2,591,956	+	motB	LU632_RS13565	0.64	+0.4
2,591,956	+	motB	LU632_RS13565	0.64	-0.1
2,591,957	-	motB	LU632_RS13565	0.64	-0.5
2,592,007	-	motB	LU632_RS13565	0.69	+0.7
2,592,007	-	motB	LU632_RS13565	0.69	+0.5
2,592,053	-	motB	LU632_RS13565	0.73	+0.6
2,592,094	+	motB	LU632_RS13565	0.77	-0.4
2,592,095	-	motB	LU632_RS13565	0.77	-0.4
2,592,234	+				-1.3