Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12265

Experiment: Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)
2,330,390	+				+0.1
2,330,390	+				-2.3
2,330,391	-				+0.6
2,330,391	-				+0.9
2,330,391	-				+0.1
2,330,393	+				-0.1
2,330,393	+				-0.3
2,330,394	-				+0.3
2,330,394	-				-0.4
2,330,394	-				+0.3
2,330,394	-				+1.7
2,330,395	+				+1.2
2,330,395	+				+1.3
2,330,395	+				-1.0
2,330,396	-				+1.7
2,330,396	-				-2.4
2,330,398	-				-0.3
2,330,398	-				+0.8
2,330,553	-				-0.5
2,330,634	+		LU632_RS12260	0.19	+2.5
2,330,634	+		LU632_RS12260	0.19	+0.3
2,331,112	-				+0.0
2,332,513	-				+1.3
2,332,520	+				-0.5
2,332,520	+				+0.1
2,332,520	+				+1.2
2,332,520	+				-0.8
2,332,520	+				+1.1
2,332,520	+				-3.0
2,332,520	+				-0.3
2,332,521	-				+2.7
2,332,521	-				+0.5
2,332,521	-				+0.0
2,332,522	+				-0.3
2,332,522	+				-1.3
2,332,522	+				-2.8
2,332,522	+				+0.3
2,332,523	-				-0.6
2,332,523	-				-0.6
2,332,523	-				+1.1
2,332,537	+				-1.1
2,332,538	-				-0.3
2,332,538	-				-0.9
2,332,538	-				-0.1
2,332,538	-				-0.7
2,332,538	-				-0.1
2,332,630	+		LU632_RS12270	0.14	-0.7
2,332,718	-		LU632_RS12270	0.39	-1.3
2,332,931	+				+0.3
2,332,931	+				-0.1
2,332,948	+				-0.0
2,332,981	+				+0.3
2,332,994	+				-1.7
2,333,129	-		LU632_RS12275	0.52	-0.9
2,333,187	-		LU632_RS12275	0.70	-0.3
2,333,205	-		LU632_RS12275	0.76	+0.0