Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11205

Experiment: Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)
2,143,640	+				+0.6
2,143,641	-				+1.3
2,143,641	-				-0.3
2,143,678	-				+0.3
2,143,851	-				-0.8
2,143,875	-				+1.3
2,143,918	+				+0.2
2,143,926	+				-0.6
2,143,966	+				-0.6
2,143,990	-				-2.0
2,143,990	-				+0.2
2,144,561	-				+0.3
2,144,561	-				+0.4
2,144,564	+				-1.2
2,144,564	+				+0.5
2,144,565	-				+1.2
2,144,565	-				-0.8
2,144,565	-				+0.3
2,144,565	-				-1.5
2,144,565	-				+1.3
2,144,565	-				-1.1
2,144,565	-				+1.7
2,144,565	-				+1.3
2,144,565	-				+0.2
2,144,565	-				+1.2
2,144,565	-				-1.6
2,144,566	+				+0.7
2,144,583	-				+0.2
2,144,727	+		LU632_RS11205	0.22	+0.9
2,144,727	+		LU632_RS11205	0.22	-3.2
2,144,981	-		LU632_RS11205	0.83	-0.4
2,144,992	-		LU632_RS11205	0.85	-1.4
2,145,126	+				+0.2
2,145,138	-				-0.8
2,145,138	-				-0.1
2,145,192	-				+3.4
2,145,330	+				+1.7
2,145,330	+				+0.3
2,145,331	-				-1.0
2,145,331	-				-0.2
2,145,331	-				+1.7
2,145,400	-				-2.0
2,145,426	+				+2.0
2,145,477	+		LU632_RS11210	0.23	-0.1
2,145,477	+		LU632_RS11210	0.23	-1.0
2,145,477	+		LU632_RS11210	0.23	+0.0
2,145,477	+		LU632_RS11210	0.23	-0.3
2,145,545	+		LU632_RS11210	0.50	+2.7
2,145,633	-		LU632_RS11210	0.86	-0.1
2,145,662	+				-1.1
2,145,663	-				+0.5
2,145,667	-				-1.2
2,145,742	-				-0.4
2,145,754	-				-1.8
2,145,817	+				+0.7
2,145,908	+				+0.0
2,145,909	-				-0.1
2,145,917	+				-0.6
2,145,976	+				+0.9