Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10835

Experiment: Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)
2,067,375	-		LU632_RS10830	0.68	+0.6
2,068,698	+				-1.1
2,068,711	-				-0.4
2,068,752	+				-1.1
2,068,810	+				-0.4
2,068,810	+				+0.5
2,068,824	-				-0.3
2,068,825	+				-0.6
2,068,826	-				+1.4
2,068,826	-				-0.2
2,068,850	-				+1.2
2,068,850	-				-0.6
2,068,934	-				+0.4
2,068,992	+				+1.4
2,068,992	+				+0.6
2,068,993	-				+0.0
2,068,993	-				+0.1
2,069,032	-				-0.6
2,069,068	+				+0.1
2,069,068	+				+0.7
2,069,068	+				+0.5
2,069,069	-				+1.2
2,069,085	-				+1.4
2,069,139	+				+0.8
2,069,140	-				+1.7
2,069,159	+				-0.9
2,069,159	+				-0.1
2,069,159	+				-0.2
2,069,160	-				+0.6
2,069,194	+				-0.4
2,069,215	+				-2.0
2,069,347	+	osmE	LU632_RS10840	0.25	+1.3
2,069,348	-	osmE	LU632_RS10840	0.25	-0.8
2,069,348	-	osmE	LU632_RS10840	0.25	-0.4
2,069,437	-	osmE	LU632_RS10840	0.52	-1.1
2,069,440	-	osmE	LU632_RS10840	0.53	+4.5
2,069,470	+	osmE	LU632_RS10840	0.62	+0.6
2,069,471	-	osmE	LU632_RS10840	0.62	+1.9
2,069,474	+	osmE	LU632_RS10840	0.63	+0.2
2,069,474	+	osmE	LU632_RS10840	0.63	-0.8
2,069,475	-	osmE	LU632_RS10840	0.63	-0.4
2,069,475	-	osmE	LU632_RS10840	0.63	+1.3
2,069,475	-	osmE	LU632_RS10840	0.63	+0.8
2,069,478	-	osmE	LU632_RS10840	0.64	+0.6
2,069,478	-	osmE	LU632_RS10840	0.64	-1.3
2,069,478	-	osmE	LU632_RS10840	0.64	+0.2
2,069,494	-	osmE	LU632_RS10840	0.69	-0.5
2,069,506	+	osmE	LU632_RS10840	0.72	+1.2
2,069,518	+	osmE	LU632_RS10840	0.76	-0.5
2,069,518	+	osmE	LU632_RS10840	0.76	+0.3
2,069,519	-	osmE	LU632_RS10840	0.76	-1.8
2,069,520	+	osmE	LU632_RS10840	0.76	-1.0
2,069,545	+	osmE	LU632_RS10840	0.84	-2.2
2,069,600	-				-1.7
2,069,600	-				-2.0
2,069,600	-				+0.6
2,069,600	-				-0.3