Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08900

Experiment: Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)
1,680,942	+				+1.4
1,680,964	+				+0.0
1,680,965	-				-1.7
1,681,059	+				+1.1
1,681,059	+				-1.6
1,681,060	-				+2.0
1,681,060	-				+1.2
1,681,060	-				+0.3
1,681,060	-				-1.4
1,681,135	-				+1.2
1,681,135	-				+0.5
1,681,178	-				+0.3
1,681,178	-				-0.4
1,681,230	-				-0.3
1,681,233	-				-0.2
1,681,243	-				-0.1
1,681,247	+				-0.2
1,681,247	+				-0.1
1,681,247	+				+0.1
1,681,248	-				+0.1
1,681,249	+				-1.5
1,681,250	-				+1.0
1,681,250	-				+1.1
1,681,250	-				-0.2
1,681,260	+				+0.3
1,681,337	+				-0.3
1,681,386	+				+1.6
1,681,457	+				+2.4
1,681,457	+				-0.4
1,681,460	-				-1.0
1,681,469	-				+0.4
1,681,497	-				+0.0
1,682,308	+				+0.7
1,682,571	-		LU632_RS08905	0.52	-0.6
1,682,592	+		LU632_RS08905	0.58	-0.6
1,682,614	+		LU632_RS08905	0.63	+0.4
1,682,615	-		LU632_RS08905	0.63	+0.4
1,682,615	-		LU632_RS08905	0.63	-1.0
1,682,678	+		LU632_RS08905	0.79	-0.1
1,682,747	+				+0.5
1,682,747	+				-0.0
1,682,748	-				+0.1
1,682,748	-				-1.1
1,682,751	+				+0.2
1,682,779	-				-1.2
1,682,779	-				-1.7
1,682,901	+		LU632_RS08910	0.17	-0.9
1,682,911	+		LU632_RS08910	0.20	-1.5
1,682,911	+		LU632_RS08910	0.20	+0.7
1,682,911	+		LU632_RS08910	0.20	+0.0
1,682,911	+		LU632_RS08910	0.20	+0.2
1,682,911	+		LU632_RS08910	0.20	+0.4
1,682,912	-		LU632_RS08910	0.21	-0.8
1,682,912	-		LU632_RS08910	0.21	+0.7
1,682,912	-		LU632_RS08910	0.21	+0.7
1,683,066	+		LU632_RS08910	0.70	+1.5
1,683,066	+		LU632_RS08910	0.70	-0.4
1,683,079	-		LU632_RS08910	0.74	+0.1
1,683,106	-		LU632_RS08910	0.83	+2.0
1,683,191	-				-0.5
1,683,211	+				-0.1
1,683,212	-				+0.4
1,683,261	+				+0.3
1,683,269	+				+0.4
1,683,313	-				+0.8
1,683,318	-				-1.8