Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08695

Experiment: Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)
1,633,525	+		LU632_RS08690	0.69	+2.7
1,633,628	+		LU632_RS08690	0.72	-0.1
1,633,628	+		LU632_RS08690	0.72	+0.9
1,633,629	-		LU632_RS08690	0.72	-0.9
1,633,713	-		LU632_RS08690	0.75	+1.2
1,633,819	+		LU632_RS08690	0.78	+0.3
1,634,005	+		LU632_RS08690	0.84	+0.6
1,634,005	+		LU632_RS08690	0.84	-0.6
1,634,056	+		LU632_RS08690	0.86	-0.2
1,634,150	+		LU632_RS08690	0.89	+3.3
1,634,151	-		LU632_RS08690	0.89	-0.3
1,634,243	+				-0.7
1,634,243	+				-0.1
1,634,244	-				+0.9
1,634,432	-				-0.1
1,634,432	-				+2.8
1,634,453	-				+0.0
1,634,716	-		LU632_RS08695	0.17	+0.4
1,634,869	-		LU632_RS08695	0.30	+0.0
1,634,899	-		LU632_RS08695	0.32	-0.1
1,634,930	-		LU632_RS08695	0.35	+0.0
1,634,930	-		LU632_RS08695	0.35	-0.0
1,635,085	-		LU632_RS08695	0.47	+0.8
1,635,089	+		LU632_RS08695	0.48	+0.4
1,635,090	-		LU632_RS08695	0.48	+0.7
1,635,090	-		LU632_RS08695	0.48	-0.1
1,635,090	-		LU632_RS08695	0.48	-0.8
1,635,090	-		LU632_RS08695	0.48	+0.2
1,635,183	+		LU632_RS08695	0.55	+0.3
1,635,183	+		LU632_RS08695	0.55	+0.1
1,635,395	-		LU632_RS08695	0.72	-2.0
1,635,395	-		LU632_RS08695	0.72	+1.0
1,635,395	-		LU632_RS08695	0.72	+0.8
1,635,410	-		LU632_RS08695	0.74	+2.0
1,635,410	-		LU632_RS08695	0.74	+0.3
1,635,480	+		LU632_RS08695	0.79	-0.1
1,635,656	+				-0.0
1,635,656	+				+0.4
1,635,657	-				+0.7
1,635,661	-				-0.0
1,635,661	-				-0.3
1,635,784	+				-0.6
1,635,798	+				+1.0
1,635,831	+				-1.6
1,635,854	+				-0.2
1,635,854	+				-0.2
1,635,858	+				+0.7
1,635,894	+				-0.6
1,636,123	-		LU632_RS08700	0.17	+0.1
1,636,175	+		LU632_RS08700	0.22	-0.8
1,636,272	+		LU632_RS08700	0.33	-0.0
1,636,273	-		LU632_RS08700	0.33	+0.4
1,636,273	-		LU632_RS08700	0.33	+0.4
1,636,321	-		LU632_RS08700	0.38	+5.4
1,636,321	-		LU632_RS08700	0.38	-0.3
1,636,333	-		LU632_RS08700	0.39	-0.7
1,636,373	+		LU632_RS08700	0.43	-1.3
1,636,374	-		LU632_RS08700	0.43	+0.5
1,636,379	-		LU632_RS08700	0.44	+0.4
1,636,433	+		LU632_RS08700	0.49	-0.0
1,636,437	+		LU632_RS08700	0.50	+2.2
1,636,592	+		LU632_RS08700	0.66	+0.4
1,636,592	+		LU632_RS08700	0.66	-1.3
1,636,593	-		LU632_RS08700	0.66	-1.0
1,636,593	-		LU632_RS08700	0.66	+0.5
1,636,596	+		LU632_RS08700	0.66	+0.4
1,636,600	-		LU632_RS08700	0.67	-0.1
1,636,697	+		LU632_RS08700	0.77	+0.4