Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06595

Experiment: Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS)
1,265,579	+				-1.9
1,265,641	-				+0.4
1,265,641	-				-1.3
1,265,699	-		LU632_RS06590	0.11	+0.7
1,265,724	+		LU632_RS06590	0.14	-0.4
1,265,724	+		LU632_RS06590	0.14	+0.6
1,265,724	+		LU632_RS06590	0.14	+0.1
1,265,724	+		LU632_RS06590	0.14	-0.8
1,265,724	+		LU632_RS06590	0.14	+0.7
1,265,724	+		LU632_RS06590	0.14	-0.1
1,265,725	-		LU632_RS06590	0.14	-0.1
1,265,756	-		LU632_RS06590	0.18	+0.1
1,265,757	+		LU632_RS06590	0.18	+0.3
1,265,757	+		LU632_RS06590	0.18	-0.2
1,265,758	-		LU632_RS06590	0.18	+0.6
1,265,787	+		LU632_RS06590	0.22	+3.0
1,265,827	-		LU632_RS06590	0.26	-0.2
1,265,934	+		LU632_RS06590	0.40	+1.1
1,265,935	-		LU632_RS06590	0.40	+0.3
1,266,139	-		LU632_RS06590	0.65	-0.5
1,266,163	+		LU632_RS06590	0.68	-0.1
1,266,164	-		LU632_RS06590	0.68	+0.4
1,266,216	+		LU632_RS06590	0.75	-0.6
1,266,280	+		LU632_RS06590	0.83	+0.1
1,266,280	+		LU632_RS06590	0.83	-0.0
1,266,282	+		LU632_RS06590	0.83	-0.3
1,266,285	+		LU632_RS06590	0.83	+0.6
1,266,285	+		LU632_RS06590	0.83	+0.5
1,266,334	-		LU632_RS06590	0.90	+2.2
1,266,379	+				-0.6
1,266,379	+				+1.1
1,266,408	-				-1.0
1,267,206	+				-0.3
1,267,206	+				+1.0
1,267,207	-				+0.2
1,267,207	-				+0.4
1,267,207	-				+0.4
1,267,256	-				+0.1
1,267,302	+				+1.3
1,267,303	-				+0.3
1,267,360	+				-1.5
1,267,360	+				+0.4
1,267,360	+				-0.7
1,267,360	+				-0.6
1,267,361	-				+1.4
1,267,361	-				-0.2
1,267,362	+				+0.4
1,267,362	+				-1.4
1,267,362	+				-0.6
1,267,363	-				+0.0
1,267,363	-				-0.3
1,267,364	+				-1.5
1,267,874	-		LU632_RS06600	0.52	-0.2
1,267,901	-		LU632_RS06600	0.54	+2.2
1,267,901	-		LU632_RS06600	0.54	-2.6
1,267,953	+		LU632_RS06600	0.59	-0.1
1,268,063	+		LU632_RS06600	0.70	-1.7
1,268,088	+		LU632_RS06600	0.73	-0.2
1,268,088	+		LU632_RS06600	0.73	-0.8
1,268,088	+		LU632_RS06600	0.73	+0.2
1,268,089	-		LU632_RS06600	0.73	-0.3
1,268,089	-		LU632_RS06600	0.73	-0.1
1,268,089	-		LU632_RS06600	0.73	-0.0
1,268,089	-		LU632_RS06600	0.73	-0.6
1,268,179	+		LU632_RS06600	0.82	+1.8
1,268,179	+		LU632_RS06600	0.82	-0.6
1,268,180	-		LU632_RS06600	0.82	+0.7
1,268,180	-		LU632_RS06600	0.82	+0.8
1,268,180	-		LU632_RS06600	0.82	+0.4
1,268,183	+		LU632_RS06600	0.82	+1.3
1,268,184	-		LU632_RS06600	0.82	+0.5