Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15245

Experiment: Experiment:TE, Melon 3 Petiole 3 (TE-S-M3-P3)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 3 (TE-S-M3-P3)
2,884,921	+				+1.0
2,884,921	+				+2.3
2,884,921	+				+0.1
2,884,921	+				-0.1
2,885,060	-				-1.1
2,885,185	-				-1.2
2,885,190	+				-1.8
2,885,190	+				-1.7
2,885,190	+				-2.0
2,885,191	-				+1.1
2,885,191	-				-0.7
2,885,191	-				+0.3
2,885,191	-				-0.9
2,885,191	-				+0.8
2,885,191	-				-0.7
2,885,194	-				-1.7
2,885,207	-				+0.0
2,885,392	+				+0.6
2,885,431	-				-1.0
2,885,455	+				-0.3
2,885,552	+				+1.7
2,885,553	-				+2.7
2,885,629	+				+0.1
2,885,713	+				-0.9
2,885,714	-				-3.4
2,885,714	-				-2.7
2,885,714	-				+0.1
2,885,714	-				-1.1
2,885,761	+				-5.1
2,885,761	+				-3.0
2,885,761	+				-0.8
2,885,762	-				-2.2
2,885,938	-	purE	LU632_RS15245	0.29	-1.7
2,886,103	+	purE	LU632_RS15245	0.61	-3.8
2,886,141	+	purE	LU632_RS15245	0.69	-3.8
2,886,386	-				+0.1
2,886,622	+	purK	LU632_RS15250	0.30	-1.7
2,886,662	+	purK	LU632_RS15250	0.34	-3.4
2,886,698	-	purK	LU632_RS15250	0.37	+0.1
2,886,812	+	purK	LU632_RS15250	0.48	+0.1
2,886,813	-	purK	LU632_RS15250	0.48	-1.5
2,886,947	+	purK	LU632_RS15250	0.60	-1.1
2,886,948	-	purK	LU632_RS15250	0.60	-0.3
2,886,948	-	purK	LU632_RS15250	0.60	-2.7
2,886,948	-	purK	LU632_RS15250	0.60	-0.5
2,886,951	+	purK	LU632_RS15250	0.60	-1.9
2,886,951	+	purK	LU632_RS15250	0.60	-2.7
2,886,951	+	purK	LU632_RS15250	0.60	-3.6
2,886,952	-	purK	LU632_RS15250	0.60	-1.4
2,886,983	+	purK	LU632_RS15250	0.63	-3.0
2,886,986	-	purK	LU632_RS15250	0.64	+1.1
2,887,029	-	purK	LU632_RS15250	0.68	-1.3
2,887,145	+	purK	LU632_RS15250	0.78	-0.1
2,887,268	+	purK	LU632_RS15250	0.90	+1.7