Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14580
Experiment: Experiment:TE, Melon 3 Petiole 3 (TE-S-M3-P3)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Experiment:TE, Melon 3 Petiole 3 (TE-S-M3-P3) |
---|---|---|---|---|---|
remove | |||||
2,772,141 | + | -1.2 | |||
2,772,148 | + | -0.8 | |||
2,772,148 | + | -0.5 | |||
2,772,296 | + | hflD | LU632_RS14580 | 0.26 | -1.9 |
2,772,296 | + | hflD | LU632_RS14580 | 0.26 | -1.1 |
2,772,297 | - | hflD | LU632_RS14580 | 0.27 | -1.6 |
2,772,496 | + | hflD | LU632_RS14580 | 0.57 | -3.8 |
2,772,496 | + | hflD | LU632_RS14580 | 0.57 | -2.3 |
2,772,496 | + | hflD | LU632_RS14580 | 0.57 | +1.1 |
2,772,507 | - | hflD | LU632_RS14580 | 0.59 | -2.2 |
2,772,511 | + | hflD | LU632_RS14580 | 0.60 | -1.4 |
2,772,534 | + | hflD | LU632_RS14580 | 0.63 | -2.1 |
2,772,535 | - | hflD | LU632_RS14580 | 0.63 | -1.2 |
2,772,547 | + | hflD | LU632_RS14580 | 0.65 | -1.8 |
2,772,548 | - | hflD | LU632_RS14580 | 0.65 | -2.8 |
Or see this region's nucleotide sequence