Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06735

Experiment: Experiment:TE, Melon 3 Petiole 3 (TE-S-M3-P3)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 3 (TE-S-M3-P3)
1,294,624	-	tkt	LU632_RS06730	0.67	+2.7
1,294,679	-	tkt	LU632_RS06730	0.69	+1.4
1,294,679	-	tkt	LU632_RS06730	0.69	+1.4
1,294,679	-	tkt	LU632_RS06730	0.69	-1.6
1,294,750	+	tkt	LU632_RS06730	0.73	+0.2
1,294,750	+	tkt	LU632_RS06730	0.73	-2.7
1,294,751	-	tkt	LU632_RS06730	0.73	+0.1
1,294,751	-	tkt	LU632_RS06730	0.73	-1.2
1,294,860	+	tkt	LU632_RS06730	0.78	-0.7
1,294,910	+	tkt	LU632_RS06730	0.81	-1.0
1,294,910	+	tkt	LU632_RS06730	0.81	-1.1
1,294,910	+	tkt	LU632_RS06730	0.81	-1.1
1,294,910	+	tkt	LU632_RS06730	0.81	+0.1
1,294,911	-	tkt	LU632_RS06730	0.81	-1.1
1,294,911	-	tkt	LU632_RS06730	0.81	-0.3
1,294,911	-	tkt	LU632_RS06730	0.81	+1.2
1,295,153	+				+0.6
1,295,153	+				-1.9
1,295,153	+				-2.2
1,295,153	+				+0.8
1,295,154	-				-0.7
1,295,154	-				-0.4
1,295,154	-				-2.1
1,295,311	+				-1.0
1,295,312	-				+2.0
1,295,398	-				+4.4
1,295,436	+				+1.2
1,295,452	+				+0.4
1,295,453	-				+0.1
1,295,596	-				-0.7
1,295,662	-		LU632_RS06735	0.11	-2.3
1,295,713	-		LU632_RS06735	0.16	+1.7
1,295,713	-		LU632_RS06735	0.16	-0.3
1,295,844	-		LU632_RS06735	0.28	-3.6
1,295,844	-		LU632_RS06735	0.28	-0.1
1,295,845	+		LU632_RS06735	0.28	-2.5
1,295,845	+		LU632_RS06735	0.28	-1.1
1,295,845	+		LU632_RS06735	0.28	-1.4
1,295,846	-		LU632_RS06735	0.28	-3.8
1,295,846	-		LU632_RS06735	0.28	-0.7
1,295,890	+		LU632_RS06735	0.32	-2.1
1,295,891	-		LU632_RS06735	0.32	-2.3
1,295,891	-		LU632_RS06735	0.32	-3.2
1,296,149	+		LU632_RS06735	0.56	-1.4
1,296,149	+		LU632_RS06735	0.56	+1.7
1,296,150	-		LU632_RS06735	0.56	+0.7
1,296,163	-		LU632_RS06735	0.57	-2.0
1,296,163	-		LU632_RS06735	0.57	+0.1
1,296,201	+		LU632_RS06735	0.61	-1.8
1,296,202	-		LU632_RS06735	0.61	+2.7
1,296,415	+		LU632_RS06735	0.81	-1.6
1,296,447	-		LU632_RS06735	0.83	-2.2
1,296,472	-		LU632_RS06735	0.86	+2.5
1,296,482	+		LU632_RS06735	0.87	-1.8
1,296,483	-		LU632_RS06735	0.87	-0.4
1,296,524	+				-2.1
1,296,661	-				+1.8
1,296,730	-				-3.4
1,296,732	+				+2.3
1,296,777	-				+2.2
1,296,777	-				-0.7
1,296,777	-				+0.8
1,296,954	+				+0.8
1,296,972	+				+1.9
1,296,972	+				+3.0
1,296,973	-				+3.4
1,296,973	-				-0.6
1,296,973	-				+0.7
1,296,990	+				+0.4
1,297,049	-				+2.8
1,297,159	-				+1.6
1,297,235	-				+2.4
1,297,265	+				+1.0
1,297,319	+				-1.6
1,297,370	-				-1.1
1,297,449	+				-0.4
1,297,493	+				+0.6
1,297,493	+				-0.0
1,297,497	-				+2.6
1,297,555	+				+3.0
1,297,556	-				+2.9
1,297,602	-				-0.7