Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS24070

Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
4,589,199	+	glpT	LU632_RS24065	0.28	-0.6
4,589,298	-	glpT	LU632_RS24065	0.35	-0.4
4,589,339	+	glpT	LU632_RS24065	0.38	-0.1
4,589,398	+	glpT	LU632_RS24065	0.42	-1.7
4,589,398	+	glpT	LU632_RS24065	0.42	+0.1
4,589,398	+	glpT	LU632_RS24065	0.42	+0.6
4,589,398	+	glpT	LU632_RS24065	0.42	+0.9
4,589,398	+	glpT	LU632_RS24065	0.42	+0.2
4,589,399	+	glpT	LU632_RS24065	0.42	-1.4
4,589,399	-	glpT	LU632_RS24065	0.42	-0.1
4,589,399	-	glpT	LU632_RS24065	0.42	+1.2
4,589,399	-	glpT	LU632_RS24065	0.42	+0.7
4,589,399	-	glpT	LU632_RS24065	0.42	-0.0
4,589,399	-	glpT	LU632_RS24065	0.42	-0.0
4,589,399	-	glpT	LU632_RS24065	0.42	-0.9
4,589,400	+	glpT	LU632_RS24065	0.42	-1.2
4,589,401	-	glpT	LU632_RS24065	0.43	+0.7
4,589,494	+	glpT	LU632_RS24065	0.49	+0.1
4,589,494	+	glpT	LU632_RS24065	0.49	-1.6
4,589,495	-	glpT	LU632_RS24065	0.50	-0.4
4,589,495	-	glpT	LU632_RS24065	0.50	+0.8
4,589,496	+	glpT	LU632_RS24065	0.50	+0.0
4,589,496	+	glpT	LU632_RS24065	0.50	+0.6
4,589,496	+	glpT	LU632_RS24065	0.50	-0.3
4,589,496	+	glpT	LU632_RS24065	0.50	-0.4
4,589,497	-	glpT	LU632_RS24065	0.50	-0.2
4,589,519	-	glpT	LU632_RS24065	0.51	+0.4
4,589,543	+	glpT	LU632_RS24065	0.53	+0.9
4,589,569	+	glpT	LU632_RS24065	0.55	-0.9
4,589,597	-	glpT	LU632_RS24065	0.57	+1.2
4,589,597	-	glpT	LU632_RS24065	0.57	+0.7
4,589,597	-	glpT	LU632_RS24065	0.57	+0.5
4,589,662	+	glpT	LU632_RS24065	0.62	-0.5
4,589,663	-	glpT	LU632_RS24065	0.62	-0.2
4,589,695	-	glpT	LU632_RS24065	0.64	-0.6
4,589,719	+	glpT	LU632_RS24065	0.66	-3.0
4,589,725	+	glpT	LU632_RS24065	0.67	-0.7
4,589,812	-	glpT	LU632_RS24065	0.73	+0.4
4,589,812	-	glpT	LU632_RS24065	0.73	+0.5
4,589,843	-	glpT	LU632_RS24065	0.75	-0.4
4,589,872	-	glpT	LU632_RS24065	0.78	+0.8
4,589,886	+	glpT	LU632_RS24065	0.79	-4.2
4,590,033	+	glpT	LU632_RS24065	0.89	-0.5
4,590,034	-	glpT	LU632_RS24065	0.90	-0.2
4,590,034	-	glpT	LU632_RS24065	0.90	-2.1
4,590,082	-				+0.7
4,590,084	+				-0.2
4,590,173	-				-0.4
4,590,288	+				-0.5
4,590,408	+	glpQ	LU632_RS24070	0.21	-0.7
4,590,409	-	glpQ	LU632_RS24070	0.21	-0.1
4,590,482	-	glpQ	LU632_RS24070	0.28	-1.2
4,590,618	+	glpQ	LU632_RS24070	0.41	-0.5
4,590,661	-	glpQ	LU632_RS24070	0.45	+0.1
4,590,698	-	glpQ	LU632_RS24070	0.49	-0.2
4,590,732	-	glpQ	LU632_RS24070	0.52	-1.0
4,590,908	+	glpQ	LU632_RS24070	0.70	-2.8
4,590,908	+	glpQ	LU632_RS24070	0.70	+0.4
4,590,909	-	glpQ	LU632_RS24070	0.70	+0.9
4,590,909	-	glpQ	LU632_RS24070	0.70	+0.6
4,590,915	-	glpQ	LU632_RS24070	0.70	-0.8
4,590,915	-	glpQ	LU632_RS24070	0.70	-0.5
4,590,960	-	glpQ	LU632_RS24070	0.75	+1.6
4,590,983	+	glpQ	LU632_RS24070	0.77	-2.7
4,591,071	+	glpQ	LU632_RS24070	0.86	+1.9
4,591,079	+	glpQ	LU632_RS24070	0.86	-1.4
4,591,079	+	glpQ	LU632_RS24070	0.86	+0.3
4,591,080	-	glpQ	LU632_RS24070	0.87	+0.0
4,591,080	-	glpQ	LU632_RS24070	0.87	+0.2
4,591,215	-				+0.6
4,591,265	+				-0.1
4,591,266	-				-0.0
4,591,267	+				+0.6
4,591,268	-				-0.3
4,591,268	-				+0.8
4,591,268	-				-0.8
4,591,269	+				-1.0
4,591,269	+				-3.6
4,591,269	+				+0.1
4,591,270	-				+0.3
4,591,270	-				+0.6
4,591,270	-				-0.4
4,591,270	-				-0.2
4,591,283	-				+0.2
4,591,448	-	yigL	LU632_RS24075	0.24	+0.0
4,591,507	-	yigL	LU632_RS24075	0.31	+0.0
4,591,524	+	yigL	LU632_RS24075	0.33	+0.6
4,591,658	-	yigL	LU632_RS24075	0.50	-1.1
4,591,667	-	yigL	LU632_RS24075	0.51	+0.0
4,591,667	-	yigL	LU632_RS24075	0.51	+1.3
4,591,670	+	yigL	LU632_RS24075	0.52	+0.8
4,591,720	-	yigL	LU632_RS24075	0.58	+0.3
4,591,755	+	yigL	LU632_RS24075	0.62	+0.2
4,591,755	+	yigL	LU632_RS24075	0.62	-0.2
4,591,756	-	yigL	LU632_RS24075	0.62	+0.3
4,591,756	-	yigL	LU632_RS24075	0.62	+0.1
4,591,756	-	yigL	LU632_RS24075	0.62	-0.3
4,591,756	-	yigL	LU632_RS24075	0.62	-1.6
4,591,784	-	yigL	LU632_RS24075	0.66	+0.3
4,591,919	+	yigL	LU632_RS24075	0.83	+1.5
4,591,919	+	yigL	LU632_RS24075	0.83	+0.1
4,591,920	-	yigL	LU632_RS24075	0.83	-1.0
4,591,920	-	yigL	LU632_RS24075	0.83	-0.7
4,591,922	-	yigL	LU632_RS24075	0.83	+2.4
4,591,922	-	yigL	LU632_RS24075	0.83	+0.3
4,592,049	-				+0.0
4,592,049	-				-0.4
4,592,053	+				+0.7
4,592,054	-				+0.5
4,592,057	+				-0.5
4,592,077	+				+0.8
4,592,105	+				-0.4
4,592,105	+				-0.9
4,592,106	-				+0.8
4,592,111	-				+0.1
4,592,112	+				-2.2
4,592,112	+				-0.4
4,592,113	-				+1.6
4,592,159	-				-0.0
4,592,205	-				+0.5