Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LU632_RS23055 and LU632_RS23060 are separated by 41 nucleotides LU632_RS23060 and LU632_RS23065 are separated by 133 nucleotides
LU632_RS23055: LU632_RS23055 - serine kinase, at 4,392,013 to 4,393,251
_RS23055
LU632_RS23060: LU632_RS23060 - ATP-grasp domain-containing protein, at 4,393,293 to 4,394,540
_RS23060
LU632_RS23065: LU632_RS23065 - amidinotransferase, at 4,394,674 to 4,395,579
_RS23065
Position (kb) 4393
4394
4395 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 4392.450 kb on + strand, within LU632_RS23055 at 4392.451 kb on - strand, within LU632_RS23055 at 4392.451 kb on - strand, within LU632_RS23055 at 4392.451 kb on - strand, within LU632_RS23055 at 4392.588 kb on + strand, within LU632_RS23055 at 4392.590 kb on + strand, within LU632_RS23055 at 4392.590 kb on + strand, within LU632_RS23055 at 4392.613 kb on + strand, within LU632_RS23055 at 4392.614 kb on - strand, within LU632_RS23055 at 4392.615 kb on + strand, within LU632_RS23055 at 4392.615 kb on + strand, within LU632_RS23055 at 4392.616 kb on - strand, within LU632_RS23055 at 4392.680 kb on + strand, within LU632_RS23055 at 4392.728 kb on - strand, within LU632_RS23055 at 4393.100 kb on - strand, within LU632_RS23055 at 4393.143 kb on + strand at 4393.309 kb on + strand at 4393.348 kb on + strand at 4393.349 kb on - strand at 4393.415 kb on - strand at 4393.517 kb on - strand, within LU632_RS23060 at 4393.559 kb on - strand, within LU632_RS23060 at 4393.627 kb on - strand, within LU632_RS23060 at 4393.627 kb on - strand, within LU632_RS23060 at 4393.648 kb on + strand, within LU632_RS23060 at 4393.649 kb on - strand, within LU632_RS23060 at 4393.651 kb on - strand, within LU632_RS23060 at 4393.651 kb on - strand, within LU632_RS23060 at 4393.707 kb on + strand, within LU632_RS23060 at 4393.751 kb on - strand, within LU632_RS23060 at 4393.779 kb on + strand, within LU632_RS23060 at 4393.780 kb on - strand, within LU632_RS23060 at 4393.806 kb on + strand, within LU632_RS23060 at 4393.808 kb on + strand, within LU632_RS23060 at 4393.808 kb on + strand, within LU632_RS23060 at 4393.809 kb on - strand, within LU632_RS23060 at 4393.943 kb on - strand, within LU632_RS23060 at 4394.439 kb on - strand at 4394.463 kb on + strand at 4394.590 kb on - strand at 4394.677 kb on + strand at 4394.677 kb on + strand at 4394.678 kb on - strand at 4394.803 kb on + strand, within LU632_RS23065 at 4394.982 kb on + strand, within LU632_RS23065 at 4395.056 kb on + strand, within LU632_RS23065 at 4395.367 kb on - strand, within LU632_RS23065 at 4395.367 kb on - strand, within LU632_RS23065 at 4395.367 kb on - strand, within LU632_RS23065 at 4395.418 kb on - strand, within LU632_RS23065 at 4395.426 kb on - strand, within LU632_RS23065 at 4395.462 kb on + strand, within LU632_RS23065 at 4395.462 kb on + strand, within LU632_RS23065 at 4395.462 kb on + strand, within LU632_RS23065
Per-strain Table
Position Strand Gene LocusTag Fraction Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) remove 4,392,450 + LU632_RS23055 0.35 -0.2 4,392,451 - LU632_RS23055 0.35 -1.6 4,392,451 - LU632_RS23055 0.35 -2.0 4,392,451 - LU632_RS23055 0.35 +0.4 4,392,588 + LU632_RS23055 0.46 +0.4 4,392,590 + LU632_RS23055 0.47 -0.4 4,392,590 + LU632_RS23055 0.47 +2.6 4,392,613 + LU632_RS23055 0.48 -1.3 4,392,614 - LU632_RS23055 0.49 -0.4 4,392,615 + LU632_RS23055 0.49 -0.5 4,392,615 + LU632_RS23055 0.49 -0.4 4,392,616 - LU632_RS23055 0.49 -0.3 4,392,680 + LU632_RS23055 0.54 -0.1 4,392,728 - LU632_RS23055 0.58 +0.2 4,393,100 - LU632_RS23055 0.88 +0.6 4,393,143 + +2.0 4,393,309 + -0.8 4,393,348 + +0.1 4,393,349 - -0.5 4,393,415 - +1.6 4,393,517 - LU632_RS23060 0.18 +0.4 4,393,559 - LU632_RS23060 0.21 -0.1 4,393,627 - LU632_RS23060 0.27 +1.6 4,393,627 - LU632_RS23060 0.27 +0.6 4,393,648 + LU632_RS23060 0.28 +0.2 4,393,649 - LU632_RS23060 0.29 +0.2 4,393,651 - LU632_RS23060 0.29 -1.0 4,393,651 - LU632_RS23060 0.29 +0.4 4,393,707 + LU632_RS23060 0.33 -0.6 4,393,751 - LU632_RS23060 0.37 +0.1 4,393,779 + LU632_RS23060 0.39 +1.0 4,393,780 - LU632_RS23060 0.39 -2.1 4,393,806 + LU632_RS23060 0.41 -0.1 4,393,808 + LU632_RS23060 0.41 -1.4 4,393,808 + LU632_RS23060 0.41 -0.2 4,393,809 - LU632_RS23060 0.41 -0.9 4,393,943 - LU632_RS23060 0.52 -1.0 4,394,439 - +1.6 4,394,463 + -0.6 4,394,590 - +0.4 4,394,677 + -1.6 4,394,677 + +0.2 4,394,678 - -0.4 4,394,803 + LU632_RS23065 0.14 -3.8 4,394,982 + LU632_RS23065 0.34 -0.6 4,395,056 + LU632_RS23065 0.42 -1.0 4,395,367 - LU632_RS23065 0.76 +0.7 4,395,367 - LU632_RS23065 0.76 -1.8 4,395,367 - LU632_RS23065 0.76 -2.0 4,395,418 - LU632_RS23065 0.82 -1.0 4,395,426 - LU632_RS23065 0.83 -0.2 4,395,462 + LU632_RS23065 0.87 -0.8 4,395,462 + LU632_RS23065 0.87 +0.6 4,395,462 + LU632_RS23065 0.87 +0.4
Or see this region's nucleotide sequence