Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS21320

Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
4,075,219	+	gltB	LU632_RS21315	0.78	+0.5
4,075,358	+	gltB	LU632_RS21315	0.82	+1.7
4,075,358	+	gltB	LU632_RS21315	0.82	+0.4
4,075,359	-	gltB	LU632_RS21315	0.82	+1.3
4,075,609	+	gltB	LU632_RS21315	0.87	+1.6
4,075,610	+	gltB	LU632_RS21315	0.87	+1.3
4,075,769	+				+0.5
4,075,822	-				+0.1
4,075,823	+				+0.3
4,075,823	+				+1.7
4,075,823	+				+2.6
4,075,823	+				+0.8
4,075,824	-				+2.4
4,075,824	-				+1.5
4,075,824	-				+2.1
4,075,835	+				+0.1
4,075,880	+				+0.4
4,075,899	+				+1.5
4,075,957	+				+2.0
4,075,958	-				+0.2
4,075,961	-				+1.1
4,075,961	-				-0.4
4,076,096	-				+3.8
4,076,138	+				-1.3
4,076,175	+				+0.8
4,076,218	+				+2.7
4,076,280	+				+0.7
4,076,280	+				-1.0
4,076,281	-				+1.6
4,076,372	+		LU632_RS21320	0.13	+1.6
4,076,372	+		LU632_RS21320	0.13	+2.2
4,076,373	-		LU632_RS21320	0.13	-1.3
4,076,373	-		LU632_RS21320	0.13	+2.1
4,076,373	-		LU632_RS21320	0.13	+0.9
4,076,373	-		LU632_RS21320	0.13	+3.0
4,076,373	-		LU632_RS21320	0.13	+1.3
4,076,376	+		LU632_RS21320	0.13	+1.4
4,076,376	+		LU632_RS21320	0.13	-0.1
4,076,376	+		LU632_RS21320	0.13	+2.3
4,076,377	-		LU632_RS21320	0.13	+2.8
4,076,377	-		LU632_RS21320	0.13	+1.5
4,076,547	-		LU632_RS21320	0.25	+0.5
4,076,547	-		LU632_RS21320	0.25	-0.8
4,076,559	+		LU632_RS21320	0.26	+3.2
4,076,559	+		LU632_RS21320	0.26	-0.0
4,076,560	-		LU632_RS21320	0.26	+1.7
4,076,571	-		LU632_RS21320	0.27	-2.0
4,076,710	-		LU632_RS21320	0.37	+1.2
4,076,852	+		LU632_RS21320	0.47	+1.4
4,076,958	+		LU632_RS21320	0.54	+1.3
4,076,958	+		LU632_RS21320	0.54	+0.1
4,076,996	+		LU632_RS21320	0.57	+0.4
4,076,996	+		LU632_RS21320	0.57	+1.4
4,076,997	-		LU632_RS21320	0.57	+2.2
4,076,997	-		LU632_RS21320	0.57	+0.8
4,076,997	-		LU632_RS21320	0.57	+1.4
4,076,997	-		LU632_RS21320	0.57	+1.3
4,077,030	+		LU632_RS21320	0.59	-0.4
4,077,056	-		LU632_RS21320	0.61	+1.5
4,077,058	+		LU632_RS21320	0.61	+0.9
4,077,058	+		LU632_RS21320	0.61	+0.6
4,077,058	+		LU632_RS21320	0.61	+2.9
4,077,058	+		LU632_RS21320	0.61	-0.9
4,077,058	+		LU632_RS21320	0.61	+1.8
4,077,059	-		LU632_RS21320	0.61	+2.2
4,077,059	-		LU632_RS21320	0.61	+1.9
4,077,061	+		LU632_RS21320	0.62	+1.6
4,077,062	-		LU632_RS21320	0.62	+0.9
4,077,064	+		LU632_RS21320	0.62	+1.8
4,077,064	+		LU632_RS21320	0.62	+1.5
4,077,065	-		LU632_RS21320	0.62	+1.5
4,077,065	-		LU632_RS21320	0.62	+0.8
4,077,065	-		LU632_RS21320	0.62	+1.0
4,077,158	+		LU632_RS21320	0.68	-0.6
4,077,158	+		LU632_RS21320	0.68	+1.3
4,077,159	-		LU632_RS21320	0.68	+2.0
4,077,205	+		LU632_RS21320	0.72	+1.0
4,077,451	+		LU632_RS21320	0.89	+1.3
4,077,452	-		LU632_RS21320	0.89	+0.6
4,077,604	-				+0.6
4,077,650	-				-0.7
4,077,815	+				-0.5
4,077,816	-				+0.2
4,077,841	+				-0.5
4,077,841	+				+0.4
4,077,842	-				-0.3
4,077,842	-				+0.3
4,077,901	-	sspB	LU632_RS21325	0.15	+0.1
4,077,992	+	sspB	LU632_RS21325	0.34	-0.3
4,078,015	-	sspB	LU632_RS21325	0.38	-0.3
4,078,018	-	sspB	LU632_RS21325	0.39	-1.0
4,078,018	-	sspB	LU632_RS21325	0.39	+0.2
4,078,041	-	sspB	LU632_RS21325	0.43	-0.4
4,078,041	-	sspB	LU632_RS21325	0.43	-0.5
4,078,045	-	sspB	LU632_RS21325	0.44	-0.6
4,078,161	+	sspB	LU632_RS21325	0.68	-0.8
4,078,162	-	sspB	LU632_RS21325	0.68	-0.4
4,078,213	+	sspB	LU632_RS21325	0.78	-2.1
4,078,225	+	sspB	LU632_RS21325	0.81	-0.6
4,078,286	+				-0.9