Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS20740

Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
3,956,127	-		LU632_RS20735	0.11	+0.6
3,956,135	+		LU632_RS20735	0.12	+0.8
3,956,136	-		LU632_RS20735	0.13	+1.1
3,956,136	-		LU632_RS20735	0.13	-1.9
3,956,136	-		LU632_RS20735	0.13	-0.3
3,956,136	-		LU632_RS20735	0.13	+0.1
3,956,136	-		LU632_RS20735	0.13	-0.3
3,956,136	-		LU632_RS20735	0.13	+1.5
3,956,136	-		LU632_RS20735	0.13	+0.4
3,956,353	+		LU632_RS20735	0.49	-0.3
3,956,353	+		LU632_RS20735	0.49	+0.4
3,956,353	+		LU632_RS20735	0.49	-0.1
3,956,354	-		LU632_RS20735	0.49	+0.5
3,956,354	-		LU632_RS20735	0.49	-1.3
3,956,354	-		LU632_RS20735	0.49	-1.9
3,956,358	+		LU632_RS20735	0.50	+1.1
3,956,359	-		LU632_RS20735	0.50	-0.2
3,956,428	-		LU632_RS20735	0.62	-0.1
3,956,481	-		LU632_RS20735	0.71	-0.3
3,956,501	+		LU632_RS20735	0.74	-0.2
3,956,538	+		LU632_RS20735	0.80	-2.4
3,956,538	+		LU632_RS20735	0.80	-0.9
3,956,862	+				-1.1
3,956,986	-				+0.5
3,956,986	-				-1.0
3,957,272	-		LU632_RS20740	0.10	+1.9
3,957,555	-		LU632_RS20740	0.25	-0.7
3,958,109	+		LU632_RS20740	0.53	-0.2
3,958,172	-		LU632_RS20740	0.56	-2.4
3,958,185	-		LU632_RS20740	0.57	-0.0
3,959,019	+				-1.0
3,959,173	-				-0.3
3,959,458	-		LU632_RS20745	0.18	-0.8
3,959,540	+		LU632_RS20745	0.22	-0.4
3,959,544	+		LU632_RS20745	0.22	+0.3
3,959,544	+		LU632_RS20745	0.22	-1.3
3,959,852	-		LU632_RS20745	0.35	+0.2