Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19495

Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
3,692,243	+	rnz	LU632_RS19490	0.18	+0.6
3,692,243	+	rnz	LU632_RS19490	0.18	-0.2
3,692,243	+	rnz	LU632_RS19490	0.18	-0.0
3,692,244	-	rnz	LU632_RS19490	0.18	+1.0
3,692,394	-	rnz	LU632_RS19490	0.34	-0.5
3,692,410	-	rnz	LU632_RS19490	0.36	-0.1
3,692,621	+	rnz	LU632_RS19490	0.59	-0.1
3,692,622	-	rnz	LU632_RS19490	0.59	-0.2
3,692,622	-	rnz	LU632_RS19490	0.59	+0.8
3,692,743	+	rnz	LU632_RS19490	0.72	+0.3
3,692,791	+	rnz	LU632_RS19490	0.78	+0.5
3,692,791	+	rnz	LU632_RS19490	0.78	-1.3
3,692,792	-	rnz	LU632_RS19490	0.78	-0.8
3,692,858	-	rnz	LU632_RS19490	0.85	+2.1
3,692,925	-				-0.4
3,692,932	+				+0.6
3,693,034	-				-0.1
3,693,108	-				-0.9
3,693,112	+				+0.8
3,693,446	+	gorA	LU632_RS19495	0.22	-2.0
3,693,682	+	gorA	LU632_RS19495	0.39	+0.3
3,694,003	+	gorA	LU632_RS19495	0.63	-1.7
3,694,016	-	gorA	LU632_RS19495	0.64	-2.7
3,694,157	+	gorA	LU632_RS19495	0.74	-0.5
3,694,286	+	gorA	LU632_RS19495	0.84	+0.3
3,694,286	+	gorA	LU632_RS19495	0.84	+0.3
3,694,287	-	gorA	LU632_RS19495	0.84	-1.1
3,694,618	+				+0.5
3,694,619	-				-2.1
3,694,634	+				-1.4
3,694,656	+				-0.4
3,694,657	-				-0.6
3,694,657	-				-1.1
3,694,661	+				-0.7
3,694,661	+				+0.2
3,694,680	-				+0.1
3,694,821	+				-1.1
3,694,821	+				-2.2
3,694,821	+				-0.1