Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17705

Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
3,324,555	+	tssK	LU632_RS17695	0.83	+0.2
3,324,555	+	tssK	LU632_RS17695	0.83	-1.2
3,324,555	+	tssK	LU632_RS17695	0.83	+2.5
3,324,556	-	tssK	LU632_RS17695	0.84	+0.5
3,324,556	-	tssK	LU632_RS17695	0.84	-0.8
3,324,644	-				+0.2
3,324,644	-				-0.1
3,324,645	+				-0.6
3,324,645	+				-0.2
3,324,645	+				-1.4
3,324,646	-				-1.2
3,324,646	-				+0.7
3,324,646	-				+0.4
3,324,646	-				+0.2
3,324,646	-				-2.2
3,324,646	-				+0.8
3,324,650	-				+1.4
3,324,650	-				+0.2
3,324,788	-				+0.5
3,324,832	+				+0.1
3,324,866	+	icmH	LU632_RS17700	0.12	-0.1
3,324,867	-	icmH	LU632_RS17700	0.12	+1.4
3,324,869	+	icmH	LU632_RS17700	0.12	+0.1
3,324,870	-	icmH	LU632_RS17700	0.12	-0.5
3,324,924	-	icmH	LU632_RS17700	0.19	-0.5
3,324,958	-	icmH	LU632_RS17700	0.24	-2.2
3,324,997	+	icmH	LU632_RS17700	0.29	-0.4
3,325,014	+	icmH	LU632_RS17700	0.31	+0.4
3,325,015	-	icmH	LU632_RS17700	0.31	+0.3
3,325,055	+	icmH	LU632_RS17700	0.36	-0.5
3,325,167	+	icmH	LU632_RS17700	0.51	-0.2
3,325,167	+	icmH	LU632_RS17700	0.51	-0.8
3,325,167	+	icmH	LU632_RS17700	0.51	+0.2
3,325,263	+	icmH	LU632_RS17700	0.63	+0.4
3,325,265	+	icmH	LU632_RS17700	0.63	+1.0
3,325,266	-	icmH	LU632_RS17700	0.63	-0.3
3,325,266	-	icmH	LU632_RS17700	0.63	-0.9
3,325,317	+	icmH	LU632_RS17700	0.70	-0.1
3,325,318	-	icmH	LU632_RS17700	0.70	-0.1
3,325,319	+	icmH	LU632_RS17700	0.70	-0.7
3,325,531	+				-1.1
3,325,531	+				-0.5
3,325,675	-				-2.1
3,325,763	-				-0.6
3,325,928	+	tssH	LU632_RS17705	0.15	-1.1
3,325,929	-	tssH	LU632_RS17705	0.15	+0.8
3,325,929	-	tssH	LU632_RS17705	0.15	-0.8
3,325,929	-	tssH	LU632_RS17705	0.15	-0.1
3,325,961	-	tssH	LU632_RS17705	0.16	+2.0
3,326,060	-	tssH	LU632_RS17705	0.20	+2.4
3,326,181	+	tssH	LU632_RS17705	0.24	+0.7
3,326,182	-	tssH	LU632_RS17705	0.24	+1.3
3,326,182	-	tssH	LU632_RS17705	0.24	-2.8
3,326,400	+	tssH	LU632_RS17705	0.33	+0.5
3,326,401	-	tssH	LU632_RS17705	0.33	-1.3
3,326,557	+	tssH	LU632_RS17705	0.39	-0.8
3,326,728	-	tssH	LU632_RS17705	0.45	+2.6
3,326,739	-	tssH	LU632_RS17705	0.46	-1.2
3,327,007	-	tssH	LU632_RS17705	0.56	+0.2
3,327,033	+	tssH	LU632_RS17705	0.57	+2.6
3,327,034	-	tssH	LU632_RS17705	0.57	-0.6
3,327,037	+	tssH	LU632_RS17705	0.57	-1.1
3,327,133	+	tssH	LU632_RS17705	0.61	-3.1
3,327,300	+	tssH	LU632_RS17705	0.67	-1.6
3,327,300	+	tssH	LU632_RS17705	0.67	+0.4
3,327,301	-	tssH	LU632_RS17705	0.67	+0.5
3,327,301	-	tssH	LU632_RS17705	0.67	-0.1
3,327,301	-	tssH	LU632_RS17705	0.67	+0.7
3,327,301	-	tssH	LU632_RS17705	0.67	-2.1
3,327,301	-	tssH	LU632_RS17705	0.67	-0.4
3,327,304	+	tssH	LU632_RS17705	0.68	-1.7
3,327,458	-	tssH	LU632_RS17705	0.73	+0.7
3,327,458	-	tssH	LU632_RS17705	0.73	+0.6
3,327,458	-	tssH	LU632_RS17705	0.73	-1.1
3,327,460	+	tssH	LU632_RS17705	0.74	-0.3
3,327,460	+	tssH	LU632_RS17705	0.74	+0.3
3,327,461	-	tssH	LU632_RS17705	0.74	-2.2
3,327,461	-	tssH	LU632_RS17705	0.74	-0.2
3,327,461	-	tssH	LU632_RS17705	0.74	+1.5
3,327,461	-	tssH	LU632_RS17705	0.74	+0.5
3,327,482	+	tssH	LU632_RS17705	0.74	+0.3
3,327,484	+	tssH	LU632_RS17705	0.74	+0.0
3,327,522	+	tssH	LU632_RS17705	0.76	+0.4
3,327,522	+	tssH	LU632_RS17705	0.76	+0.6
3,327,522	+	tssH	LU632_RS17705	0.76	+0.9
3,327,522	+	tssH	LU632_RS17705	0.76	-3.2
3,327,522	+	tssH	LU632_RS17705	0.76	+1.6
3,327,523	-	tssH	LU632_RS17705	0.76	-1.3
3,327,523	-	tssH	LU632_RS17705	0.76	+0.4
3,327,523	-	tssH	LU632_RS17705	0.76	+0.0
3,327,523	-	tssH	LU632_RS17705	0.76	-0.1
3,327,528	-	tssH	LU632_RS17705	0.76	-1.1
3,327,619	-	tssH	LU632_RS17705	0.80	+0.7
3,327,632	+	tssH	LU632_RS17705	0.80	-0.0
3,327,823	+	tssH	LU632_RS17705	0.88	+1.1
3,327,824	-	tssH	LU632_RS17705	0.88	-0.4
3,328,015	-				-0.6
3,328,048	-				+0.0
3,328,064	-				+0.4
3,328,137	+				+0.9
3,328,137	+				-0.0
3,328,137	+				+0.7
3,328,137	+				+1.6
3,328,137	+				-1.2
3,328,137	+				+0.1
3,328,138	-				-0.4
3,328,336	+		LU632_RS17710	0.24	-2.5
3,328,394	+		LU632_RS17710	0.31	+0.0
3,328,394	+		LU632_RS17710	0.31	+0.0
3,328,427	+		LU632_RS17710	0.35	+1.2
3,328,428	-		LU632_RS17710	0.35	-0.2
3,328,428	-		LU632_RS17710	0.35	+0.6
3,328,428	-		LU632_RS17710	0.35	-1.8
3,328,489	+		LU632_RS17710	0.43	+0.8
3,328,545	+		LU632_RS17710	0.50	-0.6
3,328,583	+		LU632_RS17710	0.54	-1.4
3,328,583	+		LU632_RS17710	0.54	+0.5
3,328,583	+		LU632_RS17710	0.54	-0.5
3,328,583	+		LU632_RS17710	0.54	-0.4
3,328,584	-		LU632_RS17710	0.55	+0.1
3,328,584	-		LU632_RS17710	0.55	+0.3
3,328,604	+		LU632_RS17710	0.57	+0.3
3,328,686	-		LU632_RS17710	0.67	-0.0
3,328,783	+		LU632_RS17710	0.79	-0.4
3,328,785	+		LU632_RS17710	0.79	-0.3
3,328,785	+		LU632_RS17710	0.79	+0.4
3,328,836	-		LU632_RS17710	0.86	-0.0
3,328,869	+		LU632_RS17710	0.90	-2.1
3,328,885	-				+1.4
3,328,918	+				-0.5
3,328,955	-				-0.2
3,328,980	+				+0.2
3,328,980	+				-1.7
3,328,980	+				+0.8
3,328,980	+				-2.4
3,328,981	-				+0.1
3,328,982	+				-0.0
3,328,982	+				-1.5
3,328,983	-				+1.0
3,328,983	-				-0.1
3,328,983	-				-0.0
3,328,983	-				-0.7
3,328,983	-				-0.5