Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15920

Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
3,008,637	+	galM	LU632_RS15915	0.23	+0.1
3,008,699	+	galM	LU632_RS15915	0.29	-1.4
3,008,700	-	galM	LU632_RS15915	0.29	-3.3
3,008,700	-	galM	LU632_RS15915	0.29	-1.0
3,008,831	+	galM	LU632_RS15915	0.41	-0.5
3,008,831	+	galM	LU632_RS15915	0.41	-2.6
3,008,862	+	galM	LU632_RS15915	0.44	+1.7
3,008,930	-	galM	LU632_RS15915	0.51	+1.3
3,008,982	-	galM	LU632_RS15915	0.56	-2.3
3,008,982	-	galM	LU632_RS15915	0.56	-0.0
3,009,222	+	galM	LU632_RS15915	0.79	-0.4
3,009,293	+	galM	LU632_RS15915	0.86	+2.3
3,009,293	+	galM	LU632_RS15915	0.86	-2.0
3,009,294	-	galM	LU632_RS15915	0.86	-0.7
3,009,294	-	galM	LU632_RS15915	0.86	+1.8
3,009,294	-	galM	LU632_RS15915	0.86	+0.0
3,009,418	+				-1.1
3,009,478	+				+0.7
3,009,505	+				-2.0
3,010,346	-				+0.3
3,010,404	-				-1.2
3,010,470	+				-1.0
3,010,470	+				-0.0
3,010,496	+				-0.7
3,010,538	-	aroG	LU632_RS15925	0.13	+0.0
3,010,538	-	aroG	LU632_RS15925	0.13	+1.6
3,010,538	-	aroG	LU632_RS15925	0.13	-2.5
3,010,588	+	aroG	LU632_RS15925	0.18	-0.6
3,010,657	-	aroG	LU632_RS15925	0.24	-0.4
3,010,657	-	aroG	LU632_RS15925	0.24	-1.1
3,010,733	+	aroG	LU632_RS15925	0.31	-1.5
3,010,733	+	aroG	LU632_RS15925	0.31	+1.3
3,010,733	+	aroG	LU632_RS15925	0.31	+0.3
3,010,764	+	aroG	LU632_RS15925	0.34	-1.1
3,010,765	-	aroG	LU632_RS15925	0.34	+1.2
3,010,811	+	aroG	LU632_RS15925	0.39	-1.3
3,011,001	-	aroG	LU632_RS15925	0.57	+0.2
3,011,185	+	aroG	LU632_RS15925	0.74	-0.4
3,011,207	-	aroG	LU632_RS15925	0.76	-1.4
3,011,281	+	aroG	LU632_RS15925	0.83	-0.1
3,011,281	+	aroG	LU632_RS15925	0.83	-1.3
3,011,281	+	aroG	LU632_RS15925	0.83	-2.8