Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15635

Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
2,961,369	+		LU632_RS15620	0.81	-0.3
2,961,452	+				-0.4
2,961,646	+				-0.6
2,961,647	-				+1.3
2,961,650	+				-1.7
2,961,651	-				+0.9
2,961,656	-				-2.4
2,961,666	-				-2.2
2,961,727	+				-0.0
2,961,727	+				-3.6
2,961,728	-				-0.9
2,961,728	-				+0.4
2,961,728	-				+0.2
2,961,748	+				-0.0
2,961,748	+				+0.3
2,961,752	+				-1.5
2,961,753	-				+0.3
2,961,760	+				-2.0
2,961,920	+		LU632_RS15630	0.30	+0.4
2,961,944	+		LU632_RS15630	0.42	+0.9
2,961,980	-		LU632_RS15630	0.60	-0.2
2,962,038	-		LU632_RS15630	0.88	+2.0
2,962,071	+				+0.4
2,962,071	+				+0.7
2,962,224	-		LU632_RS15635	0.47	-0.4
2,962,298	-		LU632_RS15635	0.69	-1.7
2,962,322	-		LU632_RS15635	0.76	-0.2
2,962,370	-				-2.1
2,962,370	-				-0.4
2,962,405	-				-1.3
2,962,444	-				-0.7
2,962,545	+		LU632_RS15640	0.17	-2.4
2,962,579	+		LU632_RS15640	0.28	-1.1
2,962,639	-		LU632_RS15640	0.48	-1.0
2,962,677	-		LU632_RS15640	0.61	-0.2
2,962,767	+				+0.7
2,962,767	+				+1.6
2,962,768	-				-0.7
2,962,857	+				+0.7
2,962,893	-				-0.3
2,962,986	+		LU632_RS15645	0.12	+0.6
2,962,987	-		LU632_RS15645	0.12	+1.1
2,962,987	-		LU632_RS15645	0.12	-0.2
2,963,253	+		LU632_RS15645	0.39	+0.5
2,963,336	+		LU632_RS15645	0.47	-0.4
2,963,337	-		LU632_RS15645	0.47	-2.9
2,963,337	-		LU632_RS15645	0.47	+2.8
2,963,342	-		LU632_RS15645	0.48	-3.7
2,963,388	-		LU632_RS15645	0.52	+0.3