Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13540

Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
2,584,081	-		LU632_RS13535	0.58	-0.1
2,584,275	-		LU632_RS13535	0.70	+0.6
2,584,349	+		LU632_RS13535	0.74	+0.3
2,584,350	-		LU632_RS13535	0.74	-0.3
2,584,353	+		LU632_RS13535	0.75	-0.4
2,584,354	-		LU632_RS13535	0.75	-2.7
2,584,354	-		LU632_RS13535	0.75	+0.2
2,584,354	-		LU632_RS13535	0.75	+0.5
2,584,379	+		LU632_RS13535	0.76	+0.5
2,584,380	-		LU632_RS13535	0.76	+1.7
2,584,380	-		LU632_RS13535	0.76	-0.9
2,584,380	-		LU632_RS13535	0.76	-0.4
2,584,380	-		LU632_RS13535	0.76	-0.3
2,584,380	-		LU632_RS13535	0.76	+0.5
2,584,412	-		LU632_RS13535	0.78	+1.0
2,584,510	+		LU632_RS13535	0.84	+1.0
2,584,513	+		LU632_RS13535	0.85	-1.4
2,584,579	+		LU632_RS13535	0.89	-0.5
2,584,644	+				-1.1
2,584,763	+				+1.1
2,584,764	-				+0.4
2,584,764	-				+0.7
2,584,776	+				+2.0
2,584,800	+				-0.6
2,584,801	-				-2.4
2,584,903	-				-0.1
2,584,905	+				+0.7
2,584,942	+				+0.0
2,585,152	-		LU632_RS13540	0.21	+1.2
2,585,160	+		LU632_RS13540	0.21	-1.4
2,585,160	+		LU632_RS13540	0.21	-0.4
2,585,160	+		LU632_RS13540	0.21	-0.1
2,585,271	+		LU632_RS13540	0.28	-1.7
2,585,275	+		LU632_RS13540	0.28	-0.5
2,585,275	+		LU632_RS13540	0.28	+0.3
2,585,275	+		LU632_RS13540	0.28	-0.2
2,585,276	-		LU632_RS13540	0.28	+0.6
2,585,355	+		LU632_RS13540	0.33	+0.0
2,585,356	-		LU632_RS13540	0.33	+0.3
2,585,490	+		LU632_RS13540	0.41	-1.6
2,585,491	-		LU632_RS13540	0.41	+2.0
2,585,652	-		LU632_RS13540	0.50	-1.5
2,585,655	+		LU632_RS13540	0.51	+0.4
2,586,163	+		LU632_RS13540	0.81	-1.5
2,586,164	-		LU632_RS13540	0.81	+0.5
2,586,192	+		LU632_RS13540	0.83	+1.1
2,586,245	+		LU632_RS13540	0.86	+1.2
2,586,245	+		LU632_RS13540	0.86	+0.8
2,586,245	-		LU632_RS13540	0.86	+1.0
2,586,246	-		LU632_RS13540	0.86	-0.2
2,586,246	-		LU632_RS13540	0.86	+1.4
2,586,249	+		LU632_RS13540	0.86	-0.2
2,586,249	+		LU632_RS13540	0.86	-0.2
2,586,291	+		LU632_RS13540	0.89	-0.2
2,586,292	-		LU632_RS13540	0.89	+0.1
2,586,382	-				-2.7
2,586,382	-				+1.2
2,586,421	+				-0.1
2,586,422	-				+0.7
2,586,422	-				-0.1
2,586,436	+				-1.3
2,586,436	+				+1.5
2,586,442	+				+0.9
2,586,442	+				-0.5
2,586,443	-				-0.1
2,586,487	+				-2.7
2,586,488	-				-1.0
2,586,503	+				+0.5
2,586,504	-				+0.7
2,586,504	-				+0.9
2,586,504	-				+0.7
2,586,507	+				-0.1
2,586,508	-				-0.8
2,586,515	-				-0.4
2,586,593	+				-0.4