Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13170

Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
2,512,306	+				-0.1
2,512,373	-		LU632_RS13160	0.17	-0.5
2,512,436	+		LU632_RS13160	0.27	+0.9
2,512,436	+		LU632_RS13160	0.27	+1.3
2,512,437	-		LU632_RS13160	0.27	-0.0
2,512,453	+		LU632_RS13160	0.30	+0.7
2,512,453	+		LU632_RS13160	0.30	-1.4
2,512,453	+		LU632_RS13160	0.30	-0.2
2,512,513	-		LU632_RS13160	0.39	-0.5
2,512,513	-		LU632_RS13160	0.39	+0.1
2,512,674	+		LU632_RS13160	0.64	-1.6
2,512,674	+		LU632_RS13160	0.64	-0.0
2,512,674	+		LU632_RS13160	0.64	+0.5
2,512,674	+		LU632_RS13160	0.64	-1.1
2,512,675	-		LU632_RS13160	0.64	-0.5
2,512,675	-		LU632_RS13160	0.64	+0.6
2,512,703	+		LU632_RS13160	0.68	-1.1
2,512,716	+		LU632_RS13160	0.70	-1.2
2,512,716	+		LU632_RS13160	0.70	-1.1
2,512,716	+		LU632_RS13160	0.70	-0.0
2,512,717	-		LU632_RS13160	0.71	-1.0
2,512,717	-		LU632_RS13160	0.71	+0.1
2,512,811	+		LU632_RS13160	0.85	+1.9
2,512,812	-		LU632_RS13160	0.85	+0.1
2,512,839	-		LU632_RS13160	0.89	+0.2
2,512,922	-				-1.2
2,513,100	+		LU632_RS13165	0.35	+0.1
2,513,139	+		LU632_RS13165	0.54	+1.7
2,513,219	-				+0.1
2,513,262	+				+0.5
2,513,321	-		LU632_RS13170	0.27	-1.7
2,513,450	-				+0.0
2,513,450	-				-1.0
2,513,483	+				-0.4
2,513,483	+				-0.3
2,513,484	-				-0.1
2,513,543	+				+1.5
2,513,544	-				-0.6
2,513,558	+				-1.1
2,513,558	+				+1.6
2,513,567	-				+0.1
2,513,579	+				-0.3
2,513,579	+				-0.4
2,513,580	-				+0.2
2,513,594	+				-0.9
2,513,594	+				-0.8
2,513,596	+				-0.0
2,513,701	+				+0.2
2,513,702	-				-0.6
2,513,702	-				-0.6
2,513,702	-				-0.6
2,513,971	-	pabB	LU632_RS13175	0.30	-0.6
2,513,972	+	pabB	LU632_RS13175	0.30	-0.8
2,513,972	+	pabB	LU632_RS13175	0.30	+0.1
2,513,972	+	pabB	LU632_RS13175	0.30	-0.7
2,513,972	+	pabB	LU632_RS13175	0.30	-0.2
2,513,972	+	pabB	LU632_RS13175	0.30	+2.0
2,513,973	-	pabB	LU632_RS13175	0.30	-2.1
2,514,050	-	pabB	LU632_RS13175	0.35	-1.0
2,514,137	+	pabB	LU632_RS13175	0.42	+0.1
2,514,137	+	pabB	LU632_RS13175	0.42	-0.6
2,514,138	-	pabB	LU632_RS13175	0.42	-0.1