Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13100

Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
2,500,444	-				-0.9
2,501,199	+				-0.3
2,501,200	-				-0.9
2,501,235	-				+0.9
2,501,269	+				-0.2
2,501,273	+				+0.2
2,501,355	+				-1.0
2,501,389	+				+0.2
2,501,500	-		LU632_RS13100	0.16	+0.6
2,501,669	+		LU632_RS13100	0.54	+0.1
2,501,687	+		LU632_RS13100	0.58	+0.5
2,501,687	+		LU632_RS13100	0.58	-0.0
2,501,688	-		LU632_RS13100	0.58	-1.4
2,501,688	-		LU632_RS13100	0.58	-0.3
2,501,711	-		LU632_RS13100	0.63	-0.4
2,501,745	-		LU632_RS13100	0.71	+0.3
2,501,745	-		LU632_RS13100	0.71	-0.5
2,501,770	+		LU632_RS13100	0.76	+0.9
2,501,775	+		LU632_RS13100	0.77	-1.2
2,501,775	+		LU632_RS13100	0.77	+1.2
2,501,807	-		LU632_RS13100	0.85	+0.5
2,501,807	-		LU632_RS13100	0.85	+4.0
2,501,924	-				-0.8
2,501,924	-				+0.1
2,501,939	+				+1.0
2,501,942	-				-0.7
2,502,072	+		LU632_RS13105	0.20	-1.2
2,502,074	+		LU632_RS13105	0.21	-0.1
2,502,074	+		LU632_RS13105	0.21	+0.5
2,502,074	+		LU632_RS13105	0.21	+0.2
2,502,081	+		LU632_RS13105	0.22	+0.0
2,502,105	+		LU632_RS13105	0.25	+0.6
2,502,105	+		LU632_RS13105	0.25	-0.1
2,502,106	-		LU632_RS13105	0.25	-0.4
2,502,333	+		LU632_RS13105	0.60	-0.2
2,502,334	-		LU632_RS13105	0.60	-3.2
2,502,397	+		LU632_RS13105	0.70	-0.6
2,502,398	-		LU632_RS13105	0.70	-0.1
2,502,407	-		LU632_RS13105	0.71	+0.3
2,502,437	-		LU632_RS13105	0.76	-0.5
2,502,438	+		LU632_RS13105	0.76	-0.5
2,502,439	-		LU632_RS13105	0.76	+0.3
2,502,522	-		LU632_RS13105	0.88	-0.8
2,502,526	-		LU632_RS13105	0.89	-0.1
2,502,541	+				+0.9
2,502,541	+				+0.2
2,502,546	+				-0.3
2,502,546	+				+0.2
2,502,547	-				+0.4
2,502,547	-				-0.3
2,502,562	+				-0.4
2,502,563	-				-1.0
2,502,594	-				-1.0
2,502,597	+				-0.3
2,502,597	+				-0.9
2,502,597	+				+0.0
2,502,598	-				+1.4
2,502,671	+				-1.2
2,502,671	+				-0.3
2,502,700	+				-0.7
2,502,700	+				+2.8
2,502,700	+				-1.0
2,502,701	-				+1.0
2,502,701	-				+0.0
2,502,701	-				-0.2
2,502,762	+				-0.0
2,502,763	-				-0.2
2,502,781	+				+0.2
2,502,787	-				+0.9
2,502,787	-				+0.6
2,502,825	-				+0.1