Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13070

Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
2,493,376	+	dadX	LU632_RS13065	0.40	-0.4
2,494,014	-				-0.1
2,494,145	+				-1.5
2,494,145	+				-1.2
2,494,145	+				-3.9
2,494,145	+				-0.5
2,494,145	+				-1.8
2,494,157	+				-2.4
2,494,158	+				-4.1
2,494,158	-				-1.0
2,494,353	-		LU632_RS13070	0.24	-0.6
2,494,400	+		LU632_RS13070	0.28	+0.2
2,494,401	-		LU632_RS13070	0.28	+1.2
2,494,448	-		LU632_RS13070	0.31	-1.7
2,494,448	-		LU632_RS13070	0.31	-1.3
2,494,514	-		LU632_RS13070	0.36	-1.0
2,494,592	-		LU632_RS13070	0.43	+0.2
2,494,592	-		LU632_RS13070	0.43	-0.6
2,494,674	-		LU632_RS13070	0.49	-2.3
2,494,676	+		LU632_RS13070	0.49	-0.5
2,494,677	-		LU632_RS13070	0.49	+0.3
2,494,677	-		LU632_RS13070	0.49	+0.5
2,494,784	+		LU632_RS13070	0.57	-2.9
2,494,784	+		LU632_RS13070	0.57	-0.4
2,494,784	+		LU632_RS13070	0.57	-1.4
2,494,785	-		LU632_RS13070	0.57	-1.3
2,494,972	-		LU632_RS13070	0.72	+2.2
2,494,996	+		LU632_RS13070	0.74	+0.4
2,495,016	-		LU632_RS13070	0.75	+0.4
2,495,046	-		LU632_RS13070	0.78	-1.6
2,495,141	+		LU632_RS13070	0.85	-1.5
2,495,142	-		LU632_RS13070	0.85	-3.0
2,495,285	-				+0.1
2,495,396	+				-1.7
2,495,398	+				-0.1
2,495,399	-				-1.6
2,495,430	+				-0.8
2,495,432	+				-0.7
2,495,432	+				-0.3
2,495,474	-				-0.3
2,495,694	+				-0.7
2,495,694	+				+0.3
2,495,724	+				+0.8
2,495,724	+				+0.8
2,495,725	-				+0.1
2,495,746	+				-1.1
2,495,847	+				+0.6
2,495,848	-				-0.1
2,495,875	-				+1.1
2,495,923	+				-1.5
2,495,950	-				-0.7
2,496,043	-		LU632_RS13075	0.13	+0.3
2,496,095	-		LU632_RS13075	0.17	-0.1
2,496,096	+		LU632_RS13075	0.17	+0.2
2,496,096	+		LU632_RS13075	0.17	-2.8
2,496,097	-		LU632_RS13075	0.17	-0.3
2,496,150	+		LU632_RS13075	0.20	-1.1
2,496,157	+		LU632_RS13075	0.21	+1.2
2,496,240	+		LU632_RS13075	0.26	-0.5
2,496,241	-		LU632_RS13075	0.26	-0.6
2,496,241	-		LU632_RS13075	0.26	+0.3
2,496,245	-		LU632_RS13075	0.26	+0.4
2,496,307	+		LU632_RS13075	0.30	-1.8
2,496,308	-		LU632_RS13075	0.31	-0.6
2,496,308	-		LU632_RS13075	0.31	+0.2
2,496,308	-		LU632_RS13075	0.31	+0.6
2,496,309	+		LU632_RS13075	0.31	+0.4
2,496,309	+		LU632_RS13075	0.31	+0.2
2,496,309	+		LU632_RS13075	0.31	-0.7
2,496,310	-		LU632_RS13075	0.31	-0.3