Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10530

Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
2,012,160	+				-0.4
2,012,161	-				-0.3
2,012,214	+				-0.2
2,012,251	+				-1.0
2,012,251	+				+0.5
2,012,329	+				-0.5
2,012,360	+				-0.2
2,012,364	+				-0.2
2,012,365	-				+0.6
2,012,365	-				-0.4
2,012,403	-	fliP	LU632_RS10525	0.10	-0.2
2,012,416	-	fliP	LU632_RS10525	0.12	-0.3
2,012,416	-	fliP	LU632_RS10525	0.12	+0.4
2,012,416	-	fliP	LU632_RS10525	0.12	-0.1
2,012,417	+	fliP	LU632_RS10525	0.12	+0.7
2,012,546	-	fliP	LU632_RS10525	0.30	-0.1
2,012,546	-	fliP	LU632_RS10525	0.30	-0.3
2,012,561	+	fliP	LU632_RS10525	0.32	-0.6
2,012,561	+	fliP	LU632_RS10525	0.32	-0.1
2,012,562	-	fliP	LU632_RS10525	0.32	-0.6
2,012,654	+	fliP	LU632_RS10525	0.44	-0.3
2,012,655	-	fliP	LU632_RS10525	0.44	-1.0
2,012,765	+	fliP	LU632_RS10525	0.59	+0.2
2,012,768	+	fliP	LU632_RS10525	0.60	-0.1
2,012,769	-	fliP	LU632_RS10525	0.60	+0.0
2,012,802	+	fliP	LU632_RS10525	0.64	+0.7
2,012,802	+	fliP	LU632_RS10525	0.64	+0.6
2,012,861	+	fliP	LU632_RS10525	0.73	-1.3
2,013,009	+				+0.2
2,013,009	+				-1.7
2,013,009	+				+1.2
2,013,010	-				-0.4
2,013,010	-				+0.2
2,013,034	-				-0.1
2,013,034	-				-0.1
2,013,053	+				+0.2
2,013,054	-				+1.2
2,013,082	+				+1.4
2,013,083	-				+0.0
2,013,086	+				-0.1
2,013,087	-				+0.7
2,013,172	+	fliO	LU632_RS10530	0.29	+0.1
2,013,173	-	fliO	LU632_RS10530	0.29	-0.5
2,013,269	+	fliO	LU632_RS10530	0.53	+0.2
2,013,335	+	fliO	LU632_RS10530	0.70	-0.0
2,013,336	-	fliO	LU632_RS10530	0.70	+0.4
2,013,349	+	fliO	LU632_RS10530	0.73	+0.3
2,013,349	+	fliO	LU632_RS10530	0.73	+0.3
2,013,349	+	fliO	LU632_RS10530	0.73	+4.7
2,013,349	+	fliO	LU632_RS10530	0.73	+0.8
2,013,350	-	fliO	LU632_RS10530	0.73	+1.6
2,013,362	+	fliO	LU632_RS10530	0.77	+0.2
2,013,448	+				-0.1
2,013,449	-				-0.4
2,013,449	-				+0.1
2,013,517	+	fliN	LU632_RS10535	0.15	-0.1
2,013,644	+	fliN	LU632_RS10535	0.46	+0.4
2,013,923	+				+1.8
2,013,924	-				+1.1
2,013,924	-				-0.7
2,013,924	-				-0.2
2,013,956	-	fliM	LU632_RS10540	0.10	-0.1
2,014,012	+	fliM	LU632_RS10540	0.16	-0.2
2,014,012	+	fliM	LU632_RS10540	0.16	-0.0
2,014,012	+	fliM	LU632_RS10540	0.16	+1.5
2,014,013	-	fliM	LU632_RS10540	0.16	-0.5
2,014,013	-	fliM	LU632_RS10540	0.16	-0.4
2,014,013	-	fliM	LU632_RS10540	0.16	-0.7
2,014,047	+	fliM	LU632_RS10540	0.19	+2.2
2,014,048	+	fliM	LU632_RS10540	0.19	+0.5
2,014,048	-	fliM	LU632_RS10540	0.19	-0.2
2,014,127	+	fliM	LU632_RS10540	0.27	-0.3
2,014,127	+	fliM	LU632_RS10540	0.27	+0.5
2,014,128	-	fliM	LU632_RS10540	0.27	-0.1
2,014,131	+	fliM	LU632_RS10540	0.28	+0.7
2,014,131	+	fliM	LU632_RS10540	0.28	+0.1
2,014,261	-	fliM	LU632_RS10540	0.40	+0.7
2,014,325	+	fliM	LU632_RS10540	0.47	-1.3
2,014,326	-	fliM	LU632_RS10540	0.47	-1.7
2,014,326	-	fliM	LU632_RS10540	0.47	+0.4
2,014,326	-	fliM	LU632_RS10540	0.47	-0.2
2,014,367	+	fliM	LU632_RS10540	0.51	-1.8