Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08775

Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
1,648,717	-		LU632_RS08770	0.18	-2.8
1,648,749	+		LU632_RS08770	0.21	-4.1
1,648,750	-		LU632_RS08770	0.21	-3.2
1,648,862	-		LU632_RS08770	0.31	-4.2
1,648,885	+		LU632_RS08770	0.33	-4.8
1,648,886	-		LU632_RS08770	0.33	-1.0
1,648,899	-		LU632_RS08770	0.34	-2.7
1,648,975	+		LU632_RS08770	0.41	-5.8
1,648,976	-		LU632_RS08770	0.41	-2.2
1,648,992	+		LU632_RS08770	0.42	-2.3
1,648,998	+		LU632_RS08770	0.43	-5.9
1,648,999	-		LU632_RS08770	0.43	-4.4
1,648,999	-		LU632_RS08770	0.43	-1.2
1,649,014	+		LU632_RS08770	0.44	-1.4
1,649,014	+		LU632_RS08770	0.44	-1.4
1,649,050	+		LU632_RS08770	0.48	-1.8
1,649,050	+		LU632_RS08770	0.48	-0.6
1,649,234	+		LU632_RS08770	0.64	-5.6
1,649,453	-		LU632_RS08770	0.83	+1.4
1,649,456	+		LU632_RS08770	0.83	-1.4
1,649,603	+				-3.6
1,649,603	+				-3.3
1,649,665	+				-1.4
1,649,695	+				-4.2
1,649,695	+				-3.5
1,649,769	+		LU632_RS08775	0.25	-4.3
1,649,770	-		LU632_RS08775	0.25	-2.6
1,649,771	+		LU632_RS08775	0.26	-2.2
1,649,771	+		LU632_RS08775	0.26	-3.9
1,649,772	-		LU632_RS08775	0.26	-1.6
1,649,851	-		LU632_RS08775	0.44	-3.2
1,649,967	+		LU632_RS08775	0.71	-4.0
1,649,968	+		LU632_RS08775	0.71	-4.3
1,649,983	+		LU632_RS08775	0.74	-1.2
1,650,042	-		LU632_RS08775	0.88	-3.0
1,650,048	+		LU632_RS08775	0.89	-5.6
1,650,049	-		LU632_RS08775	0.89	+0.4
1,650,085	-				-2.3
1,650,112	+				-1.6
1,650,113	-				-3.5
1,650,113	-				-5.4
1,650,121	+				-2.2
1,650,225	+				-3.2
1,650,226	-				-6.1
1,650,226	-				-2.4
1,650,229	+				-2.5
1,650,229	+				-3.8
1,650,230	-				-3.6
1,650,230	-				-3.0
1,650,248	+				-2.5
1,650,249	-				-1.4
1,650,249	-				-2.4
1,650,249	-				-4.8
1,650,516	+	wzc	LU632_RS08780	0.19	-4.5
1,650,517	-	wzc	LU632_RS08780	0.19	-5.8
1,650,517	-	wzc	LU632_RS08780	0.19	-3.1
1,650,622	+	wzc	LU632_RS08780	0.24	-2.4
1,650,739	+	wzc	LU632_RS08780	0.29	-4.2
1,650,776	-	wzc	LU632_RS08780	0.31	-4.6
1,650,809	+	wzc	LU632_RS08780	0.32	-3.2
1,650,866	+	wzc	LU632_RS08780	0.35	-2.5
1,650,866	+	wzc	LU632_RS08780	0.35	-4.8
1,650,867	-	wzc	LU632_RS08780	0.35	-4.2
1,650,867	-	wzc	LU632_RS08780	0.35	-2.4
1,650,867	-	wzc	LU632_RS08780	0.35	-1.6
1,650,974	-	wzc	LU632_RS08780	0.40	-2.5
1,650,982	+	wzc	LU632_RS08780	0.40	-0.6
1,651,012	+	wzc	LU632_RS08780	0.41	-4.4
1,651,013	-	wzc	LU632_RS08780	0.41	-2.0
1,651,013	-	wzc	LU632_RS08780	0.41	-1.2
1,651,013	-	wzc	LU632_RS08780	0.41	-2.0
1,651,013	-	wzc	LU632_RS08780	0.41	-4.8
1,651,052	-	wzc	LU632_RS08780	0.43	-1.6
1,651,056	+	wzc	LU632_RS08780	0.43	-1.2
1,651,057	-	wzc	LU632_RS08780	0.43	-4.5