Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08275

Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
1,555,258	+				+0.4
1,555,259	-				-0.8
1,555,259	-				+1.0
1,555,264	-				+0.4
1,555,415	+		LU632_RS08265	0.43	-0.7
1,555,415	+		LU632_RS08265	0.43	-0.2
1,555,417	+		LU632_RS08265	0.45	-0.8
1,555,417	+		LU632_RS08265	0.45	-0.8
1,555,418	-		LU632_RS08265	0.45	-0.1
1,555,418	-		LU632_RS08265	0.45	+1.3
1,555,418	-		LU632_RS08265	0.45	-0.4
1,555,431	-		LU632_RS08265	0.54	+0.7
1,555,543	+				+0.2
1,555,544	-				+1.1
1,555,652	+	purN	LU632_RS08270	0.15	-0.3
1,555,665	+	purN	LU632_RS08270	0.17	-2.5
1,555,714	+	purN	LU632_RS08270	0.24	-0.6
1,555,715	-	purN	LU632_RS08270	0.24	-0.3
1,555,930	+	purN	LU632_RS08270	0.58	-0.9
1,555,930	+	purN	LU632_RS08270	0.58	+1.4
1,555,931	-	purN	LU632_RS08270	0.58	+0.3
1,555,931	-	purN	LU632_RS08270	0.58	+1.6
1,555,933	-	purN	LU632_RS08270	0.59	-0.9
1,555,933	-	purN	LU632_RS08270	0.59	-1.6
1,555,962	+	purN	LU632_RS08270	0.63	-0.1
1,555,962	+	purN	LU632_RS08270	0.63	+0.4
1,555,963	-	purN	LU632_RS08270	0.63	-1.8
1,555,983	-	purN	LU632_RS08270	0.66	+0.4
1,556,278	+				-6.5
1,556,279	-				-3.4
1,556,432	-	purM	LU632_RS08275	0.23	-3.6
1,556,502	+	purM	LU632_RS08275	0.30	-2.4
1,556,550	-	purM	LU632_RS08275	0.34	-5.6
1,556,553	+	purM	LU632_RS08275	0.34	-5.7
1,556,589	+	purM	LU632_RS08275	0.38	-0.2
1,556,774	+	purM	LU632_RS08275	0.56	-3.1
1,556,774	+	purM	LU632_RS08275	0.56	-1.2
1,556,789	+	purM	LU632_RS08275	0.57	-4.5
1,556,790	-	purM	LU632_RS08275	0.57	-3.6
1,556,909	+	purM	LU632_RS08275	0.69	-2.7
1,556,909	+	purM	LU632_RS08275	0.69	-3.1
1,556,909	+	purM	LU632_RS08275	0.69	-2.8
1,556,909	+	purM	LU632_RS08275	0.69	-0.6
1,556,910	-	purM	LU632_RS08275	0.69	-3.8
1,556,910	-	purM	LU632_RS08275	0.69	-2.6
1,556,912	+	purM	LU632_RS08275	0.69	-1.4
1,556,912	+	purM	LU632_RS08275	0.69	-5.8
1,556,913	-	purM	LU632_RS08275	0.69	-1.4
1,557,157	-				-2.7
1,557,209	+				-0.2
1,557,209	+				-0.9
1,557,280	-				+0.6
1,557,295	+				-0.2
1,557,402	-				+0.9
1,557,406	-				-2.2
1,557,406	-				+2.4
1,557,406	-				+1.1
1,557,433	+				-0.1
1,557,434	+				+0.1
1,557,495	-				-1.6
1,557,515	+				-0.9
1,557,516	-				+1.0
1,557,761	+	upp	LU632_RS08280	0.45	-0.2
1,557,761	+	upp	LU632_RS08280	0.45	-0.1
1,557,762	-	upp	LU632_RS08280	0.45	-2.3
1,557,899	+	upp	LU632_RS08280	0.67	+0.3
1,558,012	-	upp	LU632_RS08280	0.85	-2.5
1,558,101	+				-1.6
1,558,107	+				-0.1
1,558,107	+				+0.7
1,558,108	-				+0.0
1,558,191	-		LU632_RS08285	0.56	-1.4
1,558,191	-		LU632_RS08285	0.56	+0.7