Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08130

Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
1,521,512	+	menE	LU632_RS08125	0.53	+0.8
1,521,513	-	menE	LU632_RS08125	0.54	+1.8
1,521,516	-	menE	LU632_RS08125	0.54	-0.2
1,521,680	+	menE	LU632_RS08125	0.66	-0.3
1,521,945	-	menE	LU632_RS08125	0.85	-2.4
1,521,945	-	menE	LU632_RS08125	0.85	-0.7
1,522,052	+				+0.5
1,522,290	+				-0.9
1,522,338	+				-0.2
1,522,338	+				+0.3
1,522,395	+				+0.2
1,522,395	+				-1.8
1,522,396	-				+1.0
1,522,399	+				+1.4
1,522,399	+				+1.4
1,522,400	-				+0.7
1,522,400	-				+1.3
1,522,400	-				+0.1
1,522,400	-				+2.0
1,522,400	-				+1.4
1,522,400	-				+0.7
1,522,400	-				-0.4
1,522,400	-				-0.7
1,522,405	+				-0.0
1,522,853	+		LU632_RS08130	0.35	+3.0
1,522,853	+		LU632_RS08130	0.35	+1.9
1,522,854	-		LU632_RS08130	0.35	+0.4
1,522,953	+		LU632_RS08130	0.43	+1.5
1,523,322	+		LU632_RS08130	0.74	-0.1
1,523,322	+		LU632_RS08130	0.74	+1.4
1,523,323	-		LU632_RS08130	0.74	+0.8
1,523,323	-		LU632_RS08130	0.74	-0.2
1,523,323	-		LU632_RS08130	0.74	+0.6
1,523,550	+				+0.8
1,523,718	+				+0.1
1,523,728	+				-2.2
1,523,747	+				-0.1
1,523,747	+				+0.0
1,523,747	+				+1.2
1,523,759	+				-2.3
1,523,760	-				-0.6
1,523,760	-				+0.2
1,523,786	-				-0.2
1,523,786	-				-0.1
1,523,816	+				-0.0
1,523,817	-				+1.0
1,523,862	+				-0.2
1,523,862	+				-1.0
1,523,863	-				+0.9
1,523,863	-				-0.2
1,523,863	-				+1.3
1,523,863	-				-0.2
1,523,899	+				-0.9
1,523,899	+				+0.5
1,523,900	-				+0.1
1,523,900	-				+0.8
1,523,929	+				-1.3
1,523,951	+				+2.1
1,523,952	-				+0.9
1,523,987	-				-0.8
1,524,100	-		LU632_RS08135	0.13	+0.7
1,524,100	-		LU632_RS08135	0.13	-1.9