Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04035

Experiment: Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2)
805,782	+		LU632_RS04030	0.50	+0.9
805,796	+		LU632_RS04030	0.55	-4.0
805,797	-		LU632_RS04030	0.55	-0.8
805,808	+		LU632_RS04030	0.59	+1.1
805,813	-		LU632_RS04030	0.61	+1.1
805,813	-		LU632_RS04030	0.61	-1.0
805,813	-		LU632_RS04030	0.61	-0.5
805,815	-		LU632_RS04030	0.61	-1.2
805,894	+		LU632_RS04030	0.89	-0.1
805,970	+				+0.1
805,970	+				+1.0
805,970	+				-1.9
805,971	-				+0.2
806,196	-				-2.2
806,239	-				-0.5
806,239	-				+1.4
806,273	-				+0.9
806,276	-				+1.4
806,280	+				+0.2
806,291	+				-0.5
806,345	+				+0.1
806,346	-				-0.5
806,372	-				-1.6
806,382	-				-0.1
806,382	-				-0.3
806,400	+				-0.5
806,472	-				+0.5
806,492	+				-0.9
806,493	-				+0.0
806,604	-				-1.7
806,630	-				+0.8
806,635	+				-0.8
806,692	+				+0.3
806,693	-				-1.5
806,693	-				-1.4
806,731	+				-1.4
806,731	+				+1.8
806,732	-				+1.7
806,732	-				-1.9
806,732	-				-0.4
806,760	+				-0.4
806,776	+				-0.7
806,809	+		LU632_RS04035	0.14	-1.4
806,810	-		LU632_RS04035	0.15	-2.9
806,810	-		LU632_RS04035	0.15	-0.2
806,818	-		LU632_RS04035	0.17	+0.0
806,849	+		LU632_RS04035	0.27	-1.7
806,887	+		LU632_RS04035	0.39	-0.5
806,887	+		LU632_RS04035	0.39	+0.2
806,887	+		LU632_RS04035	0.39	-0.5
806,888	-		LU632_RS04035	0.40	+0.2
807,073	+				-0.9
807,110	+				+0.7
807,111	-				+0.6
807,113	+				+0.2
807,114	-				-0.1
807,131	-				-1.0