Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS21705

Experiment: Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)
4,150,707	+	fklB	LU632_RS21700	0.16	-1.2
4,150,847	-	fklB	LU632_RS21700	0.39	-0.7
4,150,847	-	fklB	LU632_RS21700	0.39	+1.1
4,150,966	+	fklB	LU632_RS21700	0.58	+2.7
4,150,966	+	fklB	LU632_RS21700	0.58	+2.1
4,151,183	-				-1.6
4,151,266	+				-3.3
4,151,388	+				+1.3
4,151,388	+				+0.2
4,151,390	+				-0.1
4,151,418	-				-0.1
4,151,555	+				+1.2
4,151,657	+		LU632_RS21705	0.24	-0.9
4,151,663	-		LU632_RS21705	0.25	-1.7
4,151,747	-		LU632_RS21705	0.40	+2.6
4,151,795	-		LU632_RS21705	0.48	-0.2
4,151,869	+		LU632_RS21705	0.62	+0.5
4,151,869	+		LU632_RS21705	0.62	+1.2
4,151,870	-		LU632_RS21705	0.62	-2.4
4,152,159	+				+2.1
4,152,159	+				-1.4
4,152,159	+				+0.7
4,152,160	-				-0.1
4,152,173	+				+3.1
4,152,189	+				+0.2
4,152,211	+				-0.7
4,152,295	+	rplI	LU632_RS21710	0.27	-0.9
4,152,296	-	rplI	LU632_RS21710	0.27	-0.2
4,152,296	-	rplI	LU632_RS21710	0.27	-2.5
4,152,296	-	rplI	LU632_RS21710	0.27	+1.3
4,152,339	+	rplI	LU632_RS21710	0.37	-2.0
4,152,361	-	rplI	LU632_RS21710	0.42	+1.9
4,152,378	+	rplI	LU632_RS21710	0.45	-1.9
4,152,599	-				+0.1
4,152,638	+				+1.9
4,152,682	-				+1.1