Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS20810

Experiment: Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)
3,970,758	+				-0.8
3,971,078	+		LU632_RS20800	0.58	+0.6
3,971,172	+		LU632_RS20800	0.88	-0.5
3,971,173	-		LU632_RS20800	0.89	+0.5
3,971,240	+				-1.1
3,971,413	-		LU632_RS20805	0.85	-1.7
3,971,413	-		LU632_RS20805	0.85	-2.3
3,971,439	-				+1.1
3,971,477	-				+1.2
3,971,500	-				-1.0
3,971,517	-				-0.2
3,971,799	+		LU632_RS20810	0.23	+0.1
3,972,211	-		LU632_RS20810	0.74	+0.4
3,972,610	+				-0.9
3,972,639	+				+0.8
3,972,643	+				-3.0
3,972,643	+				-3.5
3,972,643	+				+0.0
3,972,643	+				+0.0
3,972,644	-				+2.5
3,972,644	-				+2.1
3,972,644	-				-0.3
3,972,644	-				-3.5
3,972,644	-				+0.1
3,972,644	-				+0.6
3,972,645	+				-1.9
3,972,645	+				+0.7
3,972,646	-				-1.6
3,972,646	-				+0.9
3,972,647	+				-1.7
3,972,647	+				+1.4
3,972,786	-		LU632_RS20815	0.20	-0.1
3,973,005	+		LU632_RS20815	0.38	+1.0
3,973,005	+		LU632_RS20815	0.38	-0.0
3,973,006	-		LU632_RS20815	0.38	+1.3
3,973,129	-		LU632_RS20815	0.48	-1.6
3,973,141	+		LU632_RS20815	0.49	-0.3
3,973,191	+		LU632_RS20815	0.53	+1.8
3,973,192	-		LU632_RS20815	0.53	-1.9
3,973,192	-		LU632_RS20815	0.53	-1.0
3,973,192	-		LU632_RS20815	0.53	+1.8
3,973,232	+		LU632_RS20815	0.56	+0.1
3,973,233	-		LU632_RS20815	0.56	+2.5
3,973,238	-		LU632_RS20815	0.56	-2.9
3,973,238	-		LU632_RS20815	0.56	-0.4
3,973,259	+		LU632_RS20815	0.58	-0.2
3,973,359	+		LU632_RS20815	0.66	-0.9
3,973,380	+		LU632_RS20815	0.68	-3.0
3,973,387	-		LU632_RS20815	0.68	+0.5