Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS20605

Experiment: Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)
3,923,648	+		LU632_RS20595	0.59	+0.3
3,923,648	+		LU632_RS20595	0.59	+1.3
3,923,649	-		LU632_RS20595	0.59	+0.6
3,923,649	-		LU632_RS20595	0.59	+1.1
3,923,649	-		LU632_RS20595	0.59	-2.1
3,923,678	-		LU632_RS20595	0.63	-3.0
3,923,816	+		LU632_RS20595	0.78	-2.3
3,923,831	-		LU632_RS20595	0.79	-1.1
3,923,831	-		LU632_RS20595	0.79	+0.5
3,923,911	+		LU632_RS20595	0.88	-2.1
3,923,923	-		LU632_RS20595	0.90	-0.3
3,923,924	+		LU632_RS20595	0.90	+1.3
3,923,999	+				+0.3
3,923,999	+				-0.1
3,924,015	+				+0.9
3,924,075	+				+1.7
3,924,116	+		LU632_RS20600	0.14	-2.2
3,924,149	-		LU632_RS20600	0.20	+0.4
3,924,355	-		LU632_RS20600	0.61	+0.8
3,924,355	-		LU632_RS20600	0.61	-1.4
3,924,355	-		LU632_RS20600	0.61	+1.6
3,924,363	+		LU632_RS20600	0.63	-1.7
3,924,378	-		LU632_RS20600	0.66	-1.6
3,924,475	+		LU632_RS20600	0.85	-1.1
3,924,475	+		LU632_RS20600	0.85	+0.6
3,924,475	+		LU632_RS20600	0.85	+1.4
3,924,475	+		LU632_RS20600	0.85	-0.4
3,924,475	+		LU632_RS20600	0.85	+0.3
3,924,476	-		LU632_RS20600	0.85	-0.3
3,924,476	-		LU632_RS20600	0.85	+0.3
3,924,476	-		LU632_RS20600	0.85	+0.4
3,924,476	-		LU632_RS20600	0.85	-2.5
3,924,476	-		LU632_RS20600	0.85	+1.2
3,924,477	+		LU632_RS20600	0.85	-1.3
3,924,497	+		LU632_RS20600	0.89	+0.2
3,924,498	-		LU632_RS20600	0.90	+0.4
3,924,671	+				+1.4
3,924,822	+		LU632_RS20605	0.32	-1.0
3,924,822	+		LU632_RS20605	0.32	-0.6
3,924,822	+		LU632_RS20605	0.32	+2.4
3,924,822	+		LU632_RS20605	0.32	-0.5
3,924,822	+		LU632_RS20605	0.32	-0.3
3,924,822	+		LU632_RS20605	0.32	-0.8
3,924,822	+		LU632_RS20605	0.32	-0.5
3,924,822	+		LU632_RS20605	0.32	-0.6
3,924,823	-		LU632_RS20605	0.32	-1.0
3,924,823	-		LU632_RS20605	0.32	-0.2
3,924,823	-		LU632_RS20605	0.32	-1.2
3,924,842	+		LU632_RS20605	0.36	+0.2
3,924,913	+		LU632_RS20605	0.49	+0.7
3,924,914	-		LU632_RS20605	0.49	+2.3
3,924,914	-		LU632_RS20605	0.49	+1.0
3,924,921	-		LU632_RS20605	0.50	-1.6
3,924,960	+		LU632_RS20605	0.58	-1.9
3,925,071	+		LU632_RS20605	0.78	+1.8
3,925,276	-				-1.3
3,925,302	-				-0.0
3,925,307	-				+1.1
3,925,312	+				+2.5
3,925,313	-				+0.8
3,925,390	-				+0.5
3,925,390	-				-0.8
3,925,390	-				+0.9
3,925,395	+				+0.0
3,925,396	-				+0.3
3,925,404	-				-0.9