Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19740

Experiment: Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)
3,749,774	-	mqo	LU632_RS19735	0.47	+0.4
3,749,774	-	mqo	LU632_RS19735	0.47	-1.9
3,749,921	+	mqo	LU632_RS19735	0.57	+0.4
3,749,921	+	mqo	LU632_RS19735	0.57	-0.1
3,749,921	+	mqo	LU632_RS19735	0.57	+2.1
3,749,922	-	mqo	LU632_RS19735	0.57	+0.7
3,749,922	-	mqo	LU632_RS19735	0.57	+0.8
3,750,234	-	mqo	LU632_RS19735	0.76	-0.2
3,750,292	-	mqo	LU632_RS19735	0.80	+0.7
3,750,400	-	mqo	LU632_RS19735	0.87	+0.9
3,750,453	+				+0.8
3,750,457	-				-2.1
3,750,487	-				+0.9
3,750,547	-				+0.0
3,750,706	+				-2.9
3,750,706	+				+1.2
3,750,723	-				-1.5
3,750,747	+				-0.1
3,750,754	-				+0.2
3,750,754	-				-0.5
3,750,754	-				+0.4
3,750,791	+		LU632_RS19740	0.17	-1.6
3,750,791	+		LU632_RS19740	0.17	+0.4
3,750,792	-		LU632_RS19740	0.17	-1.5
3,750,792	-		LU632_RS19740	0.17	-0.4
3,750,794	-		LU632_RS19740	0.18	+0.3
3,750,817	+		LU632_RS19740	0.22	+3.2
3,750,857	-		LU632_RS19740	0.30	+0.8
3,750,859	-		LU632_RS19740	0.31	-0.0
3,750,859	-		LU632_RS19740	0.31	-0.2
3,750,881	+		LU632_RS19740	0.35	+1.7
3,750,881	+		LU632_RS19740	0.35	+0.7
3,751,001	+		LU632_RS19740	0.59	+0.3
3,751,002	-		LU632_RS19740	0.59	+0.5
3,751,005	+		LU632_RS19740	0.60	+1.0
3,751,005	+		LU632_RS19740	0.60	-1.2
3,751,009	+		LU632_RS19740	0.61	+1.4
3,751,009	+		LU632_RS19740	0.61	+0.2
3,751,153	+		LU632_RS19740	0.90	-3.1
3,751,196	-				-0.1
3,751,215	+				-0.4
3,751,215	+				+0.0
3,751,215	+				+1.2
3,751,216	-				-0.5
3,751,216	-				+1.8
3,751,216	-				+0.1
3,751,218	+				-0.8
3,751,219	-				+0.1
3,751,290	+				+0.8
3,751,291	-				+0.9
3,751,502	-		LU632_RS19745	0.41	+0.4
3,751,528	-		LU632_RS19745	0.48	-2.4
3,751,583	+		LU632_RS19745	0.63	+1.5
3,751,637	-		LU632_RS19745	0.78	-0.6
3,751,637	-		LU632_RS19745	0.78	+1.4
3,751,640	+		LU632_RS19745	0.79	+0.5
3,751,641	-		LU632_RS19745	0.79	+3.3
3,751,705	-				-0.3
3,751,716	-				-3.3
3,751,750	+				-0.8
3,751,751	-				-0.1
3,751,754	+				-0.8
3,751,754	+				+0.1
3,751,754	+				-1.2
3,751,755	-				+1.8
3,751,802	+				+0.1
3,751,821	-				+0.2
3,751,886	+		LU632_RS19750	0.19	+1.6
3,751,887	-		LU632_RS19750	0.19	+0.6
3,752,183	+		LU632_RS19750	0.77	-3.9
3,752,184	-		LU632_RS19750	0.77	+1.2